RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 RNF14Q9UBS8 474 aa18.08■□□□□ 0.48
SNAPC4-201ENST00000298532 RNF17Q9BXT8 1623 aaKnown RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 RAD51AP2Q09MP3 1159 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 E2F5Q15329 346 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 ICE2Q659A1 982 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 DCUN1D2Q6PH85 259 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 RNF168Q8IYW5 571 aaPredicted RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 TUBGCP2Q9BSJ2 902 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 ARMCX3Q9UH62 379 aaPredicted RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 KDM3AQ9Y4C1 1321 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 RPSAP08865 295 aaKnown RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 RFC1P35251 1148 aaPredicted RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 LONP1P36776 959 aaKnown RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 POLR2FP61218 127 aaKnown RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 E2F4Q16254 413 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 MMS22LQ6ZRQ5 1243 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 FNBP4Q8N3X1 1017 aaPredicted RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 TYW1Q9NV66 732 aaKnown RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 JAG2Q9Y219 1238 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 BCS1LQ9Y276 419 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 A0A087WWV3 80 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 TRPC3Q13507 836 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 ALS2CLQ60I27 953 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 GBP7Q8N8V2 638 aaPredicted RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 ZNF526Q8TF50 670 aaPredicted RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 PANX2Q96RD6 677 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 JPH2Q9BR39 696 aaPredicted RBP18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 PTPRMP28827 1452 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 FRMD3A2A2Y4 597 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 CC2D2BQ6DHV5 1058 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 EPB41L5Q9HCM4 733 aa18.07■□□□□ 0.48
SNAPC4-201ENST00000298532 CYP21A2P08686 494 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 RESTQ13127 1097 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 PSMD6Q15008 389 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 RASIP1Q5U651 963 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 DIP2CQ9Y2E4 1556 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 PPIP5K2O43314 1243 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 CLEC17AQ6ZS10 378 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 AFAP1L2Q8N4X5 818 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 TCP11Q8WWU5 503 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 TRIM4Q9C037 500 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 MAGEF1Q9HAY2 307 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 MAP3K15Q6ZN16 1313 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 BACH1O14867 736 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 EVI5O60447 810 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 RASSF7Q02833 373 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 PTGDRQ13258 359 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 IFNL3Q8IZI9 196 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 FOXP1Q9H334 677 aaPredicted RBP18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 PCDHB13Q9Y5F0 798 aa18.06■□□□□ 0.48
SNAPC4-201ENST00000298532 SOWAHDA6NJG2 315 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 THAP12O43422 761 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 ADCY8P40145 1251 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 NNTQ13423 1086 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 CNOT6LQ96LI5 555 aaKnown RBP18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 CMTR1Q8N1G2 835 aaKnown RBP18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 ACRBPQ8NEB7 543 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 IL17REQ8NFR9 667 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 RIC8AQ9NPQ8 531 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 OPHN1O60890 802 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 PHBP35232 272 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 TTC16Q8NEE8 873 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 AATFQ9NY61 560 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 PCCAP05165 728 aaPredicted RBP18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 KIF23Q02241 960 aaPredicted RBP18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 TADA2BQ86TJ2 420 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 SIRT2Q8IXJ6 389 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 CCDC89Q8N998 374 aa18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 ZSCAN10Q96SZ4 725 aaPredicted RBP18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 FTOQ9C0B1 505 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNAPC4-201ENST00000298532 MED23Q9ULK4 1368 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 SMCO2A6NFE2 343 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 SMIM24O75264 130 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 OR52Z1P0C646 297 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 TFAP4Q01664 338 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 UHMK1Q8TAS1 419 aaKnown RBP18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 TMOD4Q9NZQ9 345 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 MAN1B1Q9UKM7 699 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 MORC2Q9Y6X9 1032 aaPredicted RBP18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 SNX16P57768 344 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 SESN3P58005 492 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 PASKQ96RG2 1323 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 ARHGAP42A6NI28 874 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 LARGE1O95461 756 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 CC2D1AQ6P1N0 951 aaPredicted RBP18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 ATP2A3Q93084 1043 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 BZW2Q9Y6E2 419 aaKnown RBP18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 STK10O94804 968 aaKnown RBP18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 SCG2P13521 617 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 IFNAR2P48551 515 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 RASA3Q14644 834 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 GEN1Q17RS7 908 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 GALNT17Q6IS24 598 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 CNOT10Q9H9A5 744 aaKnown RBP18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 COPRSQ9NQ92 184 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 TPX2Q9ULW0 747 aaKnown RBP18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 RABGAP1Q9Y3P9 1069 aa18.04■□□□□ 0.48
SNAPC4-201ENST00000298532 OVOS2A0A0G2JMS6 1433 aa18.03■□□□□ 0.48
SNAPC4-201ENST00000298532 OVOS2A0A0J9YW53 1432 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms