RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.73■□□□□ 0.11
ZC3H4-201ENST00000253048 FAM114A2Q9NRY5 505 aa15.73■□□□□ 0.11
ZC3H4-201ENST00000253048 UBN2Q6ZU65 1347 aa15.73■□□□□ 0.11
ZC3H4-201ENST00000253048 XRCC5P13010 732 aaKnown RBP15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 TCOF1Q13428 1488 aaKnown RBP15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 USP17L5A8MUK1 530 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 CHL1O00533 1208 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 ADRA2BP18089 450 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 USP17L2Q6R6M4 530 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 GPKOWQ92917 476 aaPredicted RBP eCLIP15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 UTP11Q9Y3A2 253 aaKnown RBP15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 KDM5CP41229 1560 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 KCNQ3O43525 872 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 PCP11498 1178 aaKnown RBP15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 RINT1Q6NUQ1 792 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 RAB3IPQ96QF0 476 aaPredicted RBP15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 AKR1B15C9JRZ8 316 aaPredicted RBP15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 SLC4A1P02730 911 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 EPHB1P54762 984 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 RNF207Q6ZRF8 634 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 FOXP4Q8IVH2 680 aaPredicted RBP15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 SYCE1Q8N0S2 351 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 DPF3Q92784 378 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 SIX6OS1Q8N1H7 587 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 CCDC127Q96BQ5 260 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 LRRC4Q9HBW1 653 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 LZTFL1Q9NQ48 299 aa15.72■□□□□ 0.11
ZC3H4-201ENST00000253048 KIF3CO14782 793 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 ATP6V1E1P36543 226 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 KLHL30Q0D2K2 578 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 SFMBT2Q5VUG0 894 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 KRT40Q6A162 431 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 CC2D1AQ6P1N0 951 aaPredicted RBP15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 GIMAP8Q8ND71 665 aaPredicted RBP15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 TESK2Q96S53 571 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 SEC31BQ9NQW1 1179 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 ANGPTL3Q9Y5C1 460 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 AOX1Q06278 1338 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 KARSQ15046 597 aaKnown RBP15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 FAM149B1Q96BN6 582 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 DNAI1Q9UI46 699 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 TNKSO95271 1327 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 ERVV-1B6SEH8 477 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 PDE8BO95263 885 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 SKILP12757 684 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 PDXDC2PQ6P474 469 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 ATP5JP18859 108 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 NNMTP40261 264 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 MYL5Q02045 173 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 BEND3Q5T5X7 828 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 ZSCAN30Q86W11 494 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 MYOCDQ8IZQ8 938 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 SAMD9Q5K651 1589 aa15.71■□□□□ 0.11
ZC3H4-201ENST00000253048 SPATA31A6Q5VVP1 1343 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 OR52Z1P0C646 297 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 SETDB1Q15047 1291 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 DIXDC1Q155Q3 683 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 ARMCX2Q7L311 632 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 ATP2A3Q93084 1043 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 WDR11Q9BZH6 1224 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 SLC38A10Q9HBR0 1119 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 ITM2BQ9Y287 266 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 PCDHB15Q9Y5E8 787 aa15.71■□□□□ 0.1
ZC3H4-201ENST00000253048 FCER1AP12319 257 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 CRKP46108 304 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 LRRC24Q50LG9 513 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 FYB2Q5VWT5 728 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 LMNB1P20700 586 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 CYP4A11Q02928 519 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 RPS6KA2Q15349 733 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 EFCAB13Q8IY85 973 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 NELFBQ8WX92 580 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 MMTAG2Q9BU76 263 aaKnown RBP15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 CARD14Q9BXL6 1004 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 VAV2P52735 878 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 INSRP06213 1382 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 E7EWF7 191 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 RNF8O76064 485 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 PCDHB4Q9Y5E5 795 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 NEMP1O14524 444 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 SLC16A2P36021 539 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 TCP11Q8WWU5 503 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 LSM14BQ9BX40 385 aaKnown RBP15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 IFT122Q9HBG6 1241 aa15.7■□□□□ 0.1
ZC3H4-201ENST00000253048 SCG2P13521 617 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 COPB2P35606 906 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 GPR101Q96P66 508 aaPredicted RBP15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 SLF1Q9BQI6 1058 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 TTLL4Q14679 1199 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 STXBP2Q15833 593 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 RBM46Q8TBY0 533 aaKnown RBP15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 IFNKQ9P0W0 207 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 KDM6BO15054 1643 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 PHKA1P46020 1223 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 ATRIPQ8WXE1 791 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 BLZF1Q9H2G9 400 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 CIB2O75838 187 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 HSPA4P34932 840 aa15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 TWF2Q6IBS0 349 aaKnown RBP15.69■□□□□ 0.1
ZC3H4-201ENST00000253048 PLEKHM2Q8IWE5 1019 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms