RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 PCDHA4Q9UN74 947 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 TCP10L2B9ZVM9 353 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 IFNB1P01574 187 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 TNNI1P19237 187 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 CTNNA1P35221 906 aaKnown RBP18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 FBXO11Q86XK2 927 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 PAGE5Q96GU1 130 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 PARD6BQ9BYG5 372 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 ABCA9Q8IUA7 1624 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 P2RX5Q93086 422 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 TESPA1A2RU30 521 aaPredicted RBP18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 NBPF26B4DH59 902 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 NBPF10Q6P3W6 841 aaKnown RBP18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 NBPF15Q8N660 670 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 TRAPPC10P48553 1259 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 MECOMQ03112 1051 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 CCDC97Q96F63 343 aaPredicted RBP18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 CLEC11AQ9Y240 323 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
SLC1A4-201ENST00000234256 VGLL3A8MV65 326 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 PLCD3Q8N3E9 789 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 PPM1KQ8N3J5 372 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 NEDD4P46934 1319 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 MEIS1O00470 390 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 FOXN1O15353 648 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 PTPREP23469 700 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 ATP2B4P23634 1241 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 TSKSQ9UJT2 592 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 NMT2O60551 498 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 NR2F2P24468 414 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 TRPC3Q13507 836 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 SETDB1Q15047 1291 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 TSNARE1Q96NA8 513 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 EPC1Q9H2F5 836 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 TXNDC16Q9P2K2 825 aa18.87■□□□□ 0.61
SLC1A4-201ENST00000234256 STAMBPO95630 424 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 NCBP1Q09161 790 aaKnown RBP18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 STRN3Q13033 797 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 GBP6Q6ZN66 633 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 KDM3AQ9Y4C1 1321 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 PLCG1P19174 1290 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 ARL1P40616 181 aaPredicted RBP18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 ANKRD42Q8N9B4 389 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 PICK1Q9NRD5 415 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 PCP11498 1178 aaKnown RBP18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 EXOC3L4Q17RC7 722 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 GALNT17Q6IS24 598 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 PPP1R21Q6ZMI0 780 aa18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 INTS8Q75QN2 995 aaKnown RBP18.86■□□□□ 0.61
SLC1A4-201ENST00000234256 MIER3Q7Z3K6 550 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 SLC44A5Q8NCS7 719 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 E9PCH4 1651 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 PRPF3O43395 683 aaKnown RBP18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 DLATP10515 647 aaKnown RBP18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 GYS2P54840 703 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 KRT31Q15323 416 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 ZNF658Q5TYW1 1059 aaPredicted RBP18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 SYCE1Q8N0S2 351 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 FAN1Q9Y2M0 1017 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 GNA14O95837 355 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 PLA2G4DQ86XP0 818 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 SMC6Q96SB8 1091 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 KRT12Q99456 494 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 MAK16Q9BXY0 300 aaKnown RBP18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 POLD4Q9HCU8 107 aa18.85■□□□□ 0.61
SLC1A4-201ENST00000234256 CLIC2O15247 247 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 EEF1GP26641 437 aaKnown RBP18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 CAPN12Q6ZSI9 719 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 CHURC1Q8WUH1 139 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 FAM204AQ9H8W3 233 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 LARSQ9P2J5 1176 aaKnown RBP18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 SERPINB13Q9UIV8 391 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 EXOC7Q9UPT5 735 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 KRT19P08727 400 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 ODR4Q5SWX8 454 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 MB21D2Q8IYB1 491 aaPredicted RBP18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 APBA3O96018 575 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 FKBP3Q00688 224 aaKnown RBP18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 UBE2SQ16763 222 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 LIN9Q5TKA1 542 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 COL4A3BPQ9Y5P4 624 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 CLRN2A0PK11 232 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 KRT15P19012 456 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 LIG3P49916 1009 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 TAB3Q8N5C8 712 aaPredicted RBP18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 VTI1AQ96AJ9 217 aa18.84■□□□□ 0.61
SLC1A4-201ENST00000234256 BUB1BO60566 1050 aaPredicted RBP18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 NDUFA10O95299 355 aa18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 FTCDO95954 541 aa18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 CUL4BQ13620 913 aa18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 NLRX1Q86UT6 975 aa18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 VSIG1Q86XK7 387 aa18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 DBNDD1Q9H9R9 158 aa18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 TRIM49BA6NDI0 452 aa18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 GDF11O95390 407 aa18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 FAM102BQ5T8I3 360 aa18.83■□□□□ 0.61
SLC1A4-201ENST00000234256 MSANTD4Q8NCY6 345 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms