RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 RCAN1P53805 252 aa20.28■□□□□ 0.84
MRPL28-201ENST00000199706 FBXL16Q8N461 479 aa20.28■□□□□ 0.84
MRPL28-201ENST00000199706 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
MRPL28-201ENST00000199706 JMJD4Q9H9V9 463 aa20.28■□□□□ 0.84
MRPL28-201ENST00000199706 CYP39A1Q9NYL5 469 aa20.28■□□□□ 0.84
MRPL28-201ENST00000199706 ABCB11O95342 1321 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 MCM3APO60318 1980 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 SEPT4O43236 478 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 SNAP25P60880 206 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 LHX8Q68G74 356 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 STAG2Q8N3U4 1231 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 CLEC4DQ8WXI8 215 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 FGD4Q96M96 766 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 LZTS2Q9BRK4 669 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 UBA5Q9GZZ9 404 aa20.27■□□□□ 0.84
MRPL28-201ENST00000199706 DDX20Q9UHI6 824 aaKnown RBP20.27■□□□□ 0.84
MRPL28-201ENST00000199706 CCDC69A6NI79 296 aa20.26■□□□□ 0.83
MRPL28-201ENST00000199706 POTEB2H3BUK9 544 aa20.26■□□□□ 0.83
MRPL28-201ENST00000199706 CCND3P30281 292 aaPredicted RBP20.26■□□□□ 0.83
MRPL28-201ENST00000199706 GNAQP50148 359 aa20.26■□□□□ 0.83
MRPL28-201ENST00000199706 ADCK5Q3MIX3 580 aa20.26■□□□□ 0.83
MRPL28-201ENST00000199706 MUM1L1Q5H9M0 696 aa20.26■□□□□ 0.83
MRPL28-201ENST00000199706 TRPV1Q8NER1 839 aa20.26■□□□□ 0.83
MRPL28-201ENST00000199706 CTCFLQ8NI51 663 aaPredicted RBP20.26■□□□□ 0.83
MRPL28-201ENST00000199706 SPZ1Q9BXG8 430 aa20.26■□□□□ 0.83
MRPL28-201ENST00000199706 LRRC37A2A6NM11 1700 aa20.26■□□□□ 0.83
MRPL28-201ENST00000199706 ZBTB5O15062 677 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 FARP2O94887 1054 aaPredicted RBP20.25■□□□□ 0.83
MRPL28-201ENST00000199706 SLC4A3P48751 1232 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 GHRHRQ02643 423 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 COL9A3Q14050 684 aaPredicted RBP20.25■□□□□ 0.83
MRPL28-201ENST00000199706 QRICH1Q2TAL8 776 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 AMNQ9BXJ7 453 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 USP26Q9BXU7 913 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 CPVLQ9H3G5 476 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 CNPY2Q9Y2B0 182 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 SNX14Q9Y5W7 946 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 SLC12A7Q9Y666 1083 aa20.25■□□□□ 0.83
MRPL28-201ENST00000199706 BAZ2BQ9UIF8 2168 aaKnown RBP20.25■□□□□ 0.83
MRPL28-201ENST00000199706 ASB14A6NK59 587 aa20.24■□□□□ 0.83
MRPL28-201ENST00000199706 NFIBO00712 420 aa20.24■□□□□ 0.83
MRPL28-201ENST00000199706 TFRCP02786 760 aaKnown RBP20.24■□□□□ 0.83
MRPL28-201ENST00000199706 PSMA5P28066 241 aa20.24■□□□□ 0.83
MRPL28-201ENST00000199706 NFXL1Q6ZNB6 911 aa20.24■□□□□ 0.83
MRPL28-201ENST00000199706 FBXO11Q86XK2 927 aa20.24■□□□□ 0.83
MRPL28-201ENST00000199706 SAMD3Q8N6K7 520 aa20.24■□□□□ 0.83
MRPL28-201ENST00000199706 MORC4Q8TE76 937 aa20.24■□□□□ 0.83
MRPL28-201ENST00000199706 ABHD16BQ9H3Z7 469 aa20.24■□□□□ 0.83
MRPL28-201ENST00000199706 GPHNQ9NQX3 736 aaPredicted RBP20.24■□□□□ 0.83
MRPL28-201ENST00000199706 ADD3Q9UEY8 706 aaKnown RBP20.24■□□□□ 0.83
MRPL28-201ENST00000199706 DHX16O60231 1041 aaKnown RBP20.23■□□□□ 0.83
MRPL28-201ENST00000199706 MCF2L2Q86YR7 1114 aa20.23■□□□□ 0.83
MRPL28-201ENST00000199706 AGXT2Q9BYV1 514 aa20.23■□□□□ 0.83
MRPL28-201ENST00000199706 MAP3K20Q9NYL2 800 aaKnown RBP20.23■□□□□ 0.83
MRPL28-201ENST00000199706 MRPL11Q9Y3B7 192 aaKnown RBP20.23■□□□□ 0.83
MRPL28-201ENST00000199706 SOWAHBA6NEL2 793 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 CYTH3O43739 400 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 SNAI1O95863 264 aaPredicted RBP20.22■□□□□ 0.83
MRPL28-201ENST00000199706 ZNF865P0CJ78 1059 aaPredicted RBP20.22■□□□□ 0.83
MRPL28-201ENST00000199706 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 PPP2R5BQ15173 497 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 SLC35G1Q2M3R5 365 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 APOA5Q6Q788 366 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 BLOC1S2Q6QNY1 142 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 NSMFQ6X4W1 530 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 RNF207Q6ZRF8 634 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 ARMCX2Q7L311 632 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 DNERQ8NFT8 737 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 NUP133Q8WUM0 1156 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 JAKMIP1Q96N16 626 aaKnown RBP20.22■□□□□ 0.83
MRPL28-201ENST00000199706 TM6SF1Q9BZW5 370 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.22■□□□□ 0.83
MRPL28-201ENST00000199706 ASTN1O14525 1302 aa20.22■□□□□ 0.83
MRPL28-201ENST00000199706 NID2Q14112 1375 aa20.21■□□□□ 0.83
MRPL28-201ENST00000199706 PNMA6FA0A0J9YX94 578 aa20.21■□□□□ 0.83
MRPL28-201ENST00000199706 AKR1A1P14550 325 aa20.21■□□□□ 0.83
MRPL28-201ENST00000199706 MNX1P50219 401 aaPredicted RBP20.21■□□□□ 0.83
MRPL28-201ENST00000199706 RPS6P62753 249 aaKnown RBP20.21■□□□□ 0.83
MRPL28-201ENST00000199706 BAATQ14032 418 aaPredicted RBP20.21■□□□□ 0.83
MRPL28-201ENST00000199706 SYNE3Q6ZMZ3 975 aa20.21■□□□□ 0.83
MRPL28-201ENST00000199706 KATNBL1Q9H079 304 aa20.21■□□□□ 0.83
MRPL28-201ENST00000199706 ANAPC15P60006 121 aa20.2■□□□□ 0.82
MRPL28-201ENST00000199706 USH1GQ495M9 461 aa20.2■□□□□ 0.82
MRPL28-201ENST00000199706 NECAB2Q7Z6G3 386 aa20.2■□□□□ 0.82
MRPL28-201ENST00000199706 CCDC144CPQ8IYA2 1237 aa20.2■□□□□ 0.82
MRPL28-201ENST00000199706 FANCBQ8NB91 859 aa20.2■□□□□ 0.82
MRPL28-201ENST00000199706 IL17RAQ96F46 866 aa20.2■□□□□ 0.82
MRPL28-201ENST00000199706 MPHOSPH6Q99547 160 aaKnown RBP20.2■□□□□ 0.82
MRPL28-201ENST00000199706 LRRC2Q9BYS8 371 aa20.2■□□□□ 0.82
MRPL28-201ENST00000199706 RBM28Q9NW13 759 aaKnown RBP20.2■□□□□ 0.82
MRPL28-201ENST00000199706 PTPDC1A2A3K4 754 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 B4DLN1 442 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 DNM1LO00429 736 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 PPP1R11O60927 126 aaPredicted RBP20.19■□□□□ 0.82
MRPL28-201ENST00000199706 COL6A1P12109 1028 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 TAL1P17542 331 aaPredicted RBP20.19■□□□□ 0.82
MRPL28-201ENST00000199706 RPS6KB1P23443 525 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 EDNRBP24530 442 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 CNGA1P29973 690 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 MRPL12P52815 198 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms