RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Tex13cD3YU32 604 aa21.52■■□□□ 1.04
Scn1b-203ENSMUST00000211945 FosbP13346 338 aa21.52■■□□□ 1.04
Scn1b-203ENSMUST00000211945 Esyt1Q3U7R1 1092 aaKnown RBP21.52■■□□□ 1.04
Scn1b-203ENSMUST00000211945 Brd9Q3UQU0 596 aaKnown RBP21.52■■□□□ 1.04
Scn1b-203ENSMUST00000211945 Adgra1Q8C4G9 578 aa21.52■■□□□ 1.04
Scn1b-203ENSMUST00000211945 Bicd2Q921C5 820 aa21.52■■□□□ 1.04
Scn1b-203ENSMUST00000211945 NaspQ99MD9 773 aaKnown RBP21.52■■□□□ 1.04
Scn1b-203ENSMUST00000211945 Leng1Q9DB98 261 aa21.52■■□□□ 1.04
Scn1b-203ENSMUST00000211945 Trim5E9PV98 497 aa21.51■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Rnf157Q3TEL6 685 aa21.51■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Leo1Q5XJE5 667 aa21.51■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Ctu1Q99J10 420 aa21.51■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Ccdc88cQ6VGS5 2009 aa21.51■■□□□ 1.03
Scn1b-203ENSMUST00000211945 PfasQ5SUR0 1337 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Ccng2O08918 344 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Znf618Q80YY7 953 aaKnown RBP21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Dcaf8Q8N7N5 591 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 RnpepQ8VCT3 650 aaKnown RBP21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Bhmt2Q91WS4 363 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 RragcQ99K70 398 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Tmem132bF7BAB2 1078 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Aco1P28271 889 aaKnown RBP21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Rps6P62754 249 aaKnown RBP21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Pou2f2Q00196 463 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Pdlim7Q3TJD7 457 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Rgl1Q60695 768 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Ifit1Q64282 463 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Cyp4x1Q6A152 507 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Zdhhc15Q8BGJ0 337 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Zfp317Q8C0Q5 607 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Gprc5cQ8K3J9 440 aa21.5■■□□□ 1.03
Scn1b-203ENSMUST00000211945 AoahO35298 574 aa21.49■■□□□ 1.03
Scn1b-203ENSMUST00000211945 MyocO70624 490 aa21.49■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Parp2O88554 559 aa21.49■■□□□ 1.03
Scn1b-203ENSMUST00000211945 CebpaP53566 359 aa21.49■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Stim2P83093 746 aa21.49■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Rsph3aQ3UFY4 516 aa21.49■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Jakmip3Q5DTN8 844 aa21.49■■□□□ 1.03
Scn1b-203ENSMUST00000211945 JcadQ5DTX6 1320 aa21.48■■□□□ 1.03
Scn1b-203ENSMUST00000211945 FosP01101 380 aa21.48■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Tnni3kQ5GIG6 834 aa21.48■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Slc9a1Q61165 820 aa21.48■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Eif3j2Q66JS6 263 aa21.48■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Kctd10Q922M3 315 aa21.48■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Tmigd3G3X8R9 209 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Igfbp4P47879 254 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Adamts10P58459 1104 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Neurl1bQ0MW30 546 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Gm1587Q3UT80 123 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Cpa2Q504N0 417 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Hoxa13Q62424 386 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Podnl1Q6P3Y9 559 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Prkag3Q8BGM7 489 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Hsdl1Q8BTX9 330 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Pgm5Q8BZF8 567 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Slc12a8Q8VI23 705 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Hip1rQ9JKY5 1068 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Nr2e3Q9QXZ7 395 aa21.47■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Hmgcs2P54869 508 aa21.46■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Iws1Q8C1D8 766 aa21.46■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Myo1hQ9D6A1 958 aa21.46■■□□□ 1.03
Scn1b-203ENSMUST00000211945 Ralgps2Q9ERD6 590 aa21.46■■□□□ 1.03
Scn1b-203ENSMUST00000211945 SpibO35906 267 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Tmem60Q8K174 133 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Fyb2A2A995 729 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Gcnt4E9Q649 455 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Gucy1a2F8VQK3 730 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Nlrx1Q3TL44 975 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Xxylt1Q3U4G3 392 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Nt5c2Q3V1L4 560 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Acat1Q8QZT1 424 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 F11Q91Y47 624 aa21.45■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Cplx1P63040 134 aa21.44■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Gjb4Q02738 266 aa21.44■■□□□ 1.02
Scn1b-203ENSMUST00000211945 H2-Q4Q8HWB2 354 aa21.44■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Rhobtb2Q91V93 728 aa21.44■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Q9DAQ4 598 aa21.44■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Mxra8Q9DBV4 442 aa21.44■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Epha2Q03145 977 aa21.43■■□□□ 1.02
Scn1b-203ENSMUST00000211945 DSCC1Q14AI0 399 aa21.43■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Ccdc172Q810N9 267 aa21.43■■□□□ 1.02
Scn1b-203ENSMUST00000211945 DpydQ8CHR6 1025 aa21.43■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Kbtbd4Q8R179 534 aa21.43■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Nme9A0A1L1SUL6 329 aa21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Zc3h7bF8VPP8 982 aaKnown RBP21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Ccdc66Q6NS45 935 aa21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Tspyl4Q8VD63 406 aa21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Dnajc17Q91WT4 303 aa21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Ivns1abpQ920Q8 642 aa21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Rassf3Q99P51 232 aa21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Npm3Q9CPP0 175 aaKnown RBP21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 NenfQ9CQ45 171 aa21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 PtmsQ9D0J8 101 aaKnown RBP21.42■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Gm7356A0A087WSA6 508 aa21.41■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Hoxc6P10629 235 aa21.41■■□□□ 1.02
Scn1b-203ENSMUST00000211945 PogkQ80TC5 607 aa21.41■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Pgap3A2A559 320 aa21.4■■□□□ 1.02
Scn1b-203ENSMUST00000211945 MarcksP26645 309 aaKnown RBP21.4■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Psmc4P54775 418 aa21.4■■□□□ 1.02
Scn1b-203ENSMUST00000211945 Trappc10Q3TLI0 1259 aa21.4■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms