RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Ddx50Q99MJ9 734 aaKnown RBP17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Ccdc47Q9D024 483 aaKnown RBP17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 JcadQ5DTX6 1320 aa17.88■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 HttP42859 3119 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Rps6P62754 249 aaKnown RBP17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Lilrb3P97484 841 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Csf2raQ00941 388 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Tmem63bQ3TWI9 832 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Rasip1Q3U0S6 961 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Samhd1Q60710 627 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Grm4Q68EF4 912 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Kctd3Q8BFX3 815 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Phtf2Q8CB19 747 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Cmtm5Q9D6G9 156 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Alg13Q9D8C3 1166 aaKnown RBP17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Plxnb3Q9QY40 1902 aa17.87■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Cyp2d34L7N463 504 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Me1P06801 572 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Irs1P35569 1233 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 GlrbP48168 496 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 4930567H17RikQ3V0K5 233 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Oxr1Q4KMM3 866 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Cln3Q61124 438 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Tdp1Q8BJ37 609 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 PdgfcQ8CI19 345 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Tbx20Q9ES03 445 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 EspnQ9ET47 871 aa17.86■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Pramef17A2ASJ1 475 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Vwa3bJ9JI28 736 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 SpibO35906 267 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Parp1P11103 1013 aaKnown RBP17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Adamts10P58459 1104 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Palb2Q3U0P1 1104 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Prmt6Q6NZB1 378 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Ppp2r5bQ6PD28 497 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Galnt17Q7TT15 598 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 DymQ8CHY3 669 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Mrpl58Q8R035 206 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Pcdhgc5Q91XW9 944 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Slc5a5Q99PN0 618 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Cndp2Q9D1A2 475 aaKnown RBP17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Cnpy3Q9DAU1 276 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Gm5114W4VSN8 858 aa17.85■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Ncaph2Q8BSP2 607 aa17.84■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Triml1Q8BVP1 470 aa17.84■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Cdan1Q8CC12 1239 aa17.84■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Nup88Q8CEC0 753 aaKnown RBP17.84■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 SltmQ8CH25 1031 aaKnown RBP17.84■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Adgrg2Q8CJ12 1009 aa17.84■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 Mia3Q8BI84 1930 aa17.84■□□□□ 0.45
Hmgb1-208ENSMUST00000139443 PomkQ3TUA9 349 aa17.83■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Arhgef2Q60875 985 aa17.83■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Moxd2Q7TT41 619 aa17.83■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Usp6nlQ80XC3 819 aa17.83■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Vmn1r191Q8K4D0 298 aa17.83■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Bud13Q8R149 637 aa17.83■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Galntl5Q9D4M9 431 aa17.83■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Map3k20Q9ESL4 802 aaKnown RBP17.83■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Psma5Q9Z2U1 241 aaKnown RBP17.83■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Sall1Q9ER74 1322 aa17.82■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Nr5a1P33242 462 aa17.82■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Rgl1Q60695 768 aa17.82■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Ints3Q7TPD0 1041 aaKnown RBP17.82■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 NkrfQ8BY02 690 aaKnown RBP17.82■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Pms1Q8K119 917 aa17.82■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Ca9Q8VHB5 437 aa17.82■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Tmem191cQ9JJB1 302 aa17.82■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 PolkQ9QUG2 852 aa17.82■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Tlk2O55047 718 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Lnx1O70263 728 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Mt-CybP00158 381 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Mboat4P0C7A3 435 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Hoxa11P31311 313 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Esyt1Q3U7R1 1092 aaKnown RBP17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Parp3Q3ULW8 533 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Phlda1Q62392 405 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Epha10Q8BYG9 1007 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Smoc2Q8CD91 447 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Defb19Q8K3I8 83 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Msgn1Q9JK54 188 aa17.81■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 TroapB7ZNG4 668 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Ms4a2P20490 235 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Aco1P28271 889 aaKnown RBP17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Cyp2c38P56655 490 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Exosc10P56960 887 aaKnown RBP17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Tp53i13Q5F267 385 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Eif3j2Q66JS6 263 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Ppip5k2Q6ZQB6 1129 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Mcph1Q7TT79 822 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Sgsm2Q80U12 1005 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Kiaa1024Q8K3V7 917 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Tceanc2Q8R2M0 207 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 AclyQ91V92 1091 aaKnown RBP17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Vwa5aQ99KC8 793 aaKnown RBP17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Adgrf4Q9D2L6 698 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Cul5Q9D5V5 780 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Ggps1Q9WTN0 300 aa17.8■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Nlrc5C3VPR6 1915 aa17.79■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Ppef2O35385 757 aa17.79■□□□□ 0.44
Hmgb1-208ENSMUST00000139443 Prom1O54990 867 aa17.79■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms