Protein–RNA interactions for Protein: Q8CB19

Phtf2, Putative homeodomain transcription factor 2, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf2Q8CB19 Gm25239-201ENSMUST00000174915 86 ntBASIC43.9■■■■■ 4.62
Phtf2Q8CB19 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
Phtf2Q8CB19 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.01
Phtf2Q8CB19 Gm24109-201ENSMUST00000175489 103 ntBASIC38.2■■■■□ 3.71
Phtf2Q8CB19 Gm15042-201ENSMUST00000120212 883 ntBASIC38.03■■■■□ 3.68
Phtf2Q8CB19 Gm15045-201ENSMUST00000117359 883 ntBASIC37.16■■■■□ 3.54
Phtf2Q8CB19 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.09■■■■□ 3.53
Phtf2Q8CB19 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
Phtf2Q8CB19 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Phtf2Q8CB19 Gm23366-201ENSMUST00000175022 89 ntBASIC36.61■■■■□ 3.45
Phtf2Q8CB19 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Phtf2Q8CB19 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Phtf2Q8CB19 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.75■■■■□ 3.31
Phtf2Q8CB19 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Phtf2Q8CB19 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.43■■■■□ 3.26
Phtf2Q8CB19 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Phtf2Q8CB19 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.39■■■■□ 3.26
Phtf2Q8CB19 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Phtf2Q8CB19 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.2■■■■□ 3.23
Phtf2Q8CB19 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Phtf2Q8CB19 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Phtf2Q8CB19 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Phtf2Q8CB19 Gm25238-201ENSMUST00000174914 89 ntBASIC34.78■■■■□ 3.16
Phtf2Q8CB19 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.76■■■■□ 3.16
Phtf2Q8CB19 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
Phtf2Q8CB19 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
Phtf2Q8CB19 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
Phtf2Q8CB19 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.39■■■■□ 3.1
Phtf2Q8CB19 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Phtf2Q8CB19 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Phtf2Q8CB19 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.07■■■■□ 3.04
Phtf2Q8CB19 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.05■■■■□ 3.04
Phtf2Q8CB19 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
Phtf2Q8CB19 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
Phtf2Q8CB19 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.81■■■■□ 3
Phtf2Q8CB19 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.75■■■□□ 2.99
Phtf2Q8CB19 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.69■■■□□ 2.98
Phtf2Q8CB19 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.63■■■□□ 2.97
Phtf2Q8CB19 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Phtf2Q8CB19 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Phtf2Q8CB19 Gm25262-201ENSMUST00000174934 133 ntBASIC33.45■■■□□ 2.95
Phtf2Q8CB19 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.31■■■□□ 2.92
Phtf2Q8CB19 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Phtf2Q8CB19 Gm27325-201ENSMUST00000175467 74 ntBASIC33.29■■■□□ 2.92
Phtf2Q8CB19 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
Phtf2Q8CB19 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.02■■■□□ 2.88
Phtf2Q8CB19 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Phtf2Q8CB19 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Phtf2Q8CB19 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.98■■■□□ 2.87
Phtf2Q8CB19 Rab21-202ENSMUST00000218831 843 ntBASIC32.89■■■□□ 2.86
Phtf2Q8CB19 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.86■■■□□ 2.85
Phtf2Q8CB19 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.84■■■□□ 2.85
Phtf2Q8CB19 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
Phtf2Q8CB19 Gm26115-201ENSMUST00000175605 87 ntBASIC32.75■■■□□ 2.83
Phtf2Q8CB19 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Phtf2Q8CB19 Psd-208ENSMUST00000224556 2034 ntBASIC32.69■■■□□ 2.82
Phtf2Q8CB19 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Phtf2Q8CB19 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Phtf2Q8CB19 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.55■■■□□ 2.8
Phtf2Q8CB19 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Phtf2Q8CB19 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.55■■■□□ 2.8
Phtf2Q8CB19 Gm8109-201ENSMUST00000194076 746 ntBASIC32.54■■■□□ 2.8
Phtf2Q8CB19 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Phtf2Q8CB19 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Phtf2Q8CB19 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
Phtf2Q8CB19 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.47■■■□□ 2.79
Phtf2Q8CB19 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.4■■■□□ 2.78
Phtf2Q8CB19 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Phtf2Q8CB19 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Phtf2Q8CB19 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.2■■■□□ 2.75
Phtf2Q8CB19 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.2■■■□□ 2.75
Phtf2Q8CB19 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.19■■■□□ 2.74
Phtf2Q8CB19 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Phtf2Q8CB19 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Phtf2Q8CB19 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.05■■■□□ 2.72
Phtf2Q8CB19 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Phtf2Q8CB19 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Phtf2Q8CB19 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Phtf2Q8CB19 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Phtf2Q8CB19 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Phtf2Q8CB19 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Phtf2Q8CB19 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Phtf2Q8CB19 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.79■■■□□ 2.68
Phtf2Q8CB19 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.78■■■□□ 2.68
Phtf2Q8CB19 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Phtf2Q8CB19 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.68■■■□□ 2.66
Phtf2Q8CB19 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Phtf2Q8CB19 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Phtf2Q8CB19 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.65■■■□□ 2.66
Phtf2Q8CB19 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Phtf2Q8CB19 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Phtf2Q8CB19 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.6■■■□□ 2.65
Phtf2Q8CB19 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Phtf2Q8CB19 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Phtf2Q8CB19 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Phtf2Q8CB19 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
Phtf2Q8CB19 Gm24804-201ENSMUST00000174982 85 ntBASIC31.48■■■□□ 2.63
Phtf2Q8CB19 Gm27322-201ENSMUST00000184007 104 ntBASIC31.47■■■□□ 2.63
Phtf2Q8CB19 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Phtf2Q8CB19 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms