RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Gm45015A0A140LII9 184 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Gm18336A0A140LIU8 765 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Zkscan16A2ALW2 728 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Prr5lA2AVJ5 370 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 1700015F17RikD3YUK8 150 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Csf1rP09581 977 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Man2a1P27046 1150 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Rangap1P46061 589 aaKnown RBP8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 ArsaP50428 506 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Cct4P80315 539 aaKnown RBP8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Snai1Q02085 264 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Ttbk2Q3UVR3 1243 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Trim75Q3UWZ0 467 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Ptpdc1Q6NZK8 747 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Rrp12Q6P5B0 1295 aaKnown RBP8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Jade1Q6ZPI0 834 aaKnown RBP8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Ddrgk1Q80WW9 315 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Srgap3Q812A2 1099 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Fgd2Q8BY35 655 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Plin1Q8CGN5 517 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Bloc1s4Q8VED2 215 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Eif4a3Q91VC3 411 aaKnown RBP8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Lypd3Q91YK8 363 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Pbx4Q99NE9 378 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Q9D2X8 372 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Echdc1Q9D9V3 322 aa8.49□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Myo5bP21271 1818 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 HdcP23738 662 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Ighmbp2P40694 993 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 PsapQ61207 557 aaKnown RBP8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Ddx19aQ61655 478 aaKnown RBP8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Glis3Q6XP49 780 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 RestQ8VIG1 1082 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Smarca5Q91ZW3 1051 aaKnown RBP8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 St5Q924W7 1134 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 PigbQ9JJQ0 542 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Bcar3Q9QZK2 820 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Disp3A3KFU9 1347 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Sipa1l3G3X9J0 1776 aa8.48□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Ecm29Q6PDI5 1840 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Pcdh15Q99PJ1 1943 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Fcn1O70165 334 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Il4rP16382 810 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Zdhhc9P59268 364 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Eif4a1P60843 406 aaKnown RBP8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 P84750 121 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Utp18Q5SSI6 552 aaKnown RBP8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Insm1Q63ZV0 521 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Podnl1Q6P3Y9 559 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 NexnQ7TPW1 607 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Skor1Q8BX46 964 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Fez1Q8K0X8 392 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 KinQ8K339 391 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Tmem119Q8R138 280 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Tm4sf4Q91XD3 202 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Ttc5Q99LG4 440 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 MthfrQ9WU20 654 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 NinQ61043 2035 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Gm42715A0A087WP63 3095 aaKnown RBP8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 Tanc1Q0VGY8 1856 aa8.47□□□□□ -1.05
Ccdc47-202ENSMUST00000106865 1700019A02RikA0A087WPV9 146 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Gm42688A0A0R3P9D1 673 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Mamdc4A2AJA7 1228 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 MipepA6H611 711 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Fam181aJ3QNB7 292 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Prl4a1O35256 227 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Lamp2P17047 415 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Ms4a2P20490 235 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Ptpn11P35235 597 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Mansc4Q3UU94 337 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 HellsQ60848 821 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Tbc1d30Q69ZT9 766 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Mum1Q6DID5 682 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Filip1lQ6P6L0 1131 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Pcdh19Q80TF3 1145 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Ubash3bQ8BGG7 638 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Phf20Q8BLG0 1010 aaKnown RBP8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 OsgepQ8BWU5 335 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Ccdc142Q8CAI1 738 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Mylk2Q8VCR8 613 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 CrotQ9DC50 612 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Rapgef4Q9EQZ6 1011 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 MyotQ9JIF9 496 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Trim44Q9QXA7 346 aa8.46□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Ltn1Q6A009 1767 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Gm11239E9Q5Z9 360 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 OgdhlE9Q7L0 1029 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 FxnO35943 207 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Dmp1O55188 503 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 DgkaO88673 730 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Hoxd3P09027 433 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Cwc27Q3TKY6 469 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Plcl1Q3USB7 1096 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Gm428Q3UTE2 360 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Chpf2Q3UU43 768 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Dll1Q61483 722 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Bend3Q6PAL0 825 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Kcnf1Q7TSH7 493 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Gpr101Q80T62 511 aa8.45□□□□□ -1.06
Ccdc47-202ENSMUST00000106865 Bmp3Q8BHE5 468 aa8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms