RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A SHU2P38957 223 aa15.42■□□□□ 0.06
TRN1tP(UGG)A YHB1P39676 399 aaKnown RBP15.42■□□□□ 0.06
TRN1tP(UGG)A MEP1P40260 492 aa15.42■□□□□ 0.06
TRN1tP(UGG)A COA1P40452 197 aa15.42■□□□□ 0.06
TRN1tP(UGG)A ZRG17P53735 605 aa15.42■□□□□ 0.06
TRN1tP(UGG)A MRS2Q01926 470 aa15.42■□□□□ 0.06
TRN1tP(UGG)A RIF2Q06208 395 aa15.42■□□□□ 0.06
TRN1tP(UGG)A TFB4Q12004 338 aa15.42■□□□□ 0.06
TRN1tP(UGG)A COX3P00420 269 aa15.41■□□□□ 0.06
TRN1tP(UGG)A CDC21P06785 304 aa15.41■□□□□ 0.06
TRN1tP(UGG)A YHR045WP38775 560 aa15.41■□□□□ 0.06
TRN1tP(UGG)A SEC31P38968 1273 aaKnown RBP15.41■□□□□ 0.06
TRN1tP(UGG)A NOT5Q12514 560 aaPredicted RBP15.41■□□□□ 0.06
TRN1tP(UGG)A FUM1P08417 488 aaKnown RBP15.4■□□□□ 0.06
TRN1tP(UGG)A BAS1P22035 811 aa15.4■□□□□ 0.06
TRN1tP(UGG)A SPR1P32603 445 aa15.4■□□□□ 0.06
TRN1tP(UGG)A EAP1P36041 632 aaKnown RBP15.4■□□□□ 0.06
TRN1tP(UGG)A YEL073CP39974 107 aa15.4■□□□□ 0.06
TRN1tP(UGG)A SHY1P53266 389 aa15.4■□□□□ 0.06
TRN1tP(UGG)A MFB1Q04922 465 aa15.4■□□□□ 0.06
TRN1tP(UGG)A HDA3Q06623 655 aa15.4■□□□□ 0.06
TRN1tP(UGG)A GRS2Q06817 618 aa15.4■□□□□ 0.06
TRN1tP(UGG)A PLB3Q08108 686 aa15.4■□□□□ 0.06
TRN1tP(UGG)A MCD1Q12158 566 aa15.4■□□□□ 0.06
TRN1tP(UGG)A PST1Q12355 444 aa15.4■□□□□ 0.06
TRN1tP(UGG)A YPT6Q99260 215 aa15.4■□□□□ 0.06
TRN1tP(UGG)A STT4P37297 1900 aa15.39■□□□□ 0.05
TRN1tP(UGG)A SWI5P08153 709 aa15.39■□□□□ 0.05
TRN1tP(UGG)A UBP6P43593 499 aaKnown RBP15.39■□□□□ 0.05
TRN1tP(UGG)A YML119WQ03208 357 aa15.39■□□□□ 0.05
TRN1tP(UGG)A RTT10Q08924 1013 aa15.39■□□□□ 0.05
TRN1tP(UGG)A YKL100CP34248 587 aa15.38■□□□□ 0.05
TRN1tP(UGG)A NPT1P39683 429 aaKnown RBP15.38■□□□□ 0.05
TRN1tP(UGG)A SPF1P39986 1215 aaKnown RBP15.38■□□□□ 0.05
TRN1tP(UGG)A MRX1P40050 688 aa15.38■□□□□ 0.05
TRN1tP(UGG)A ECM9Q02202 377 aa15.38■□□□□ 0.05
TRN1tP(UGG)A YOL019WQ08157 551 aa15.38■□□□□ 0.05
TRN1tP(UGG)A SRO7Q12038 1033 aa15.38■□□□□ 0.05
TRN1tP(UGG)A GUK1P15454 187 aaKnown RBP15.37■□□□□ 0.05
TRN1tP(UGG)A UBA4P38820 440 aa15.37■□□□□ 0.05
TRN1tP(UGG)A YIL108WP40483 696 aaKnown RBP15.37■□□□□ 0.05
TRN1tP(UGG)A PFA3P42836 336 aa15.37■□□□□ 0.05
TRN1tP(UGG)A TY4A-JP47023 414 aa15.37■□□□□ 0.05
TRN1tP(UGG)A YJR154WP47181 346 aa15.37■□□□□ 0.05
TRN1tP(UGG)A RNR4P49723 345 aaKnown RBP15.37■□□□□ 0.05
TRN1tP(UGG)A MRM2P53123 320 aa15.37■□□□□ 0.05
TRN1tP(UGG)A SLM2P53955 656 aa15.37■□□□□ 0.05
TRN1tP(UGG)A BCH1Q05029 724 aa15.37■□□□□ 0.05
TRN1tP(UGG)A YFT2Q06676 274 aa15.37■□□□□ 0.05
TRN1tP(UGG)A NOB1Q08444 459 aaKnown RBP15.37■□□□□ 0.05
TRN1tP(UGG)A YDR056CQ12025 205 aa15.37■□□□□ 0.05
TRN1tP(UGG)A AHA1Q12449 350 aaKnown RBP15.37■□□□□ 0.05
TRN1tP(UGG)A RSR1P13856 272 aa15.36■□□□□ 0.05
TRN1tP(UGG)A MET8P15807 274 aa15.36■□□□□ 0.05
TRN1tP(UGG)A NPP1P25353 742 aa15.36■□□□□ 0.05
TRN1tP(UGG)A TFB1P32776 642 aa15.36■□□□□ 0.05
TRN1tP(UGG)A RIM11P38615 370 aa15.36■□□□□ 0.05
TRN1tP(UGG)A GIM4P40005 111 aaKnown RBP15.36■□□□□ 0.05
TRN1tP(UGG)A STB2P46679 850 aa15.36■□□□□ 0.05
TRN1tP(UGG)A OXP1P28273 1286 aa15.35■□□□□ 0.05
TRN1tP(UGG)A SDH3P33421 198 aa15.35■□□□□ 0.05
TRN1tP(UGG)A DEF1P35732 738 aaKnown RBP15.35■□□□□ 0.05
TRN1tP(UGG)A BZZ1P38822 633 aa15.35■□□□□ 0.05
TRN1tP(UGG)A AAT1Q01802 451 aa15.35■□□□□ 0.05
TRN1tP(UGG)A VPS16Q03308 798 aa15.35■□□□□ 0.05
TRN1tP(UGG)A YDR444WQ04093 687 aa15.35■□□□□ 0.05
TRN1tP(UGG)A RPN8Q08723 338 aaKnown RBP15.35■□□□□ 0.05
TRN1tP(UGG)A YCK2P23292 546 aaKnown RBP15.34■□□□□ 0.05
TRN1tP(UGG)A CLB1P24868 471 aa15.34■□□□□ 0.05
TRN1tP(UGG)A DED81P38707 554 aaKnown RBP15.34■□□□□ 0.05
TRN1tP(UGG)A GTR2P53290 341 aa15.34■□□□□ 0.05
TRN1tP(UGG)A SWS2P53937 143 aa15.34■□□□□ 0.05
TRN1tP(UGG)A YML131WQ03102 365 aa15.34■□□□□ 0.05
TRN1tP(UGG)A NIP1P32497 812 aaKnown RBP15.33■□□□□ 0.04
TRN1tP(UGG)A SOL2P37262 315 aa15.33■□□□□ 0.04
TRN1tP(UGG)A HEK2P38199 381 aaKnown RBP RIP-Chip data15.33■□□□□ 0.04not detected
TRN1tP(UGG)A YER034WP40022 185 aaKnown RBP15.33■□□□□ 0.04
TRN1tP(UGG)A EMP65P40085 556 aa15.33■□□□□ 0.04
TRN1tP(UGG)A SUB1P54000 292 aaKnown RBP15.33■□□□□ 0.04
TRN1tP(UGG)A TRM82Q03774 444 aa15.33■□□□□ 0.04
TRN1tP(UGG)A RED1P14291 827 aa15.32■□□□□ 0.04
TRN1tP(UGG)A PRP16P15938 1071 aaPredicted RBP15.32■□□□□ 0.04
TRN1tP(UGG)A CLN2P20438 545 aa15.32■□□□□ 0.04
TRN1tP(UGG)A CRM1P30822 1084 aaKnown RBP15.32■□□□□ 0.04
TRN1tP(UGG)A CTP1P38152 299 aa15.32■□□□□ 0.04
TRN1tP(UGG)A UBP14P38237 781 aaKnown RBP15.32■□□□□ 0.04
TRN1tP(UGG)A ERP5P38819 212 aa15.32■□□□□ 0.04
TRN1tP(UGG)A YHR127WP38833 243 aaKnown RBP15.32■□□□□ 0.04
TRN1tP(UGG)A GCV1P48015 400 aa15.32■□□□□ 0.04
TRN1tP(UGG)A GAS3Q03655 524 aa15.32■□□□□ 0.04
TRN1tP(UGG)A SCL1P21243 252 aaKnown RBP15.31■□□□□ 0.04
TRN1tP(UGG)A GIC1P38785 314 aa15.31■□□□□ 0.04
TRN1tP(UGG)A SCS2P40075 244 aaKnown RBP15.31■□□□□ 0.04
TRN1tP(UGG)A MPS2P53159 387 aa15.31■□□□□ 0.04
TRN1tP(UGG)A YGR015CP53208 328 aa15.31■□□□□ 0.04
TRN1tP(UGG)A NOP19P53317 196 aaPredicted RBP15.31■□□□□ 0.04
TRN1tP(UGG)A YPL109CQ02981 657 aa15.31■□□□□ 0.04
TRN1tP(UGG)A PFA4Q12006 378 aa15.31■□□□□ 0.04
TRN1tP(UGG)A YLR049CQ12110 428 aa15.31■□□□□ 0.04
TRN1tP(UGG)A RIB2Q12362 591 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms