RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	ABZ2	Q03266	374 aa		4.06	□□□□□ -1.76
GCD1	YOR260W	RRN11	Q04712	507 aa		4.06	□□□□□ -1.76
GCD1	YOR260W	SNO4	Q04902	237 aa		4.06	□□□□□ -1.76
GCD1	YOR260W	ECM22	Q05958	814 aa	Predicted RBP	4.06	□□□□□ -1.76
GCD1	YOR260W	LOT6	Q07923	191 aa		4.06	□□□□□ -1.76
GCD1	YOR260W	IZH3	Q07959	543 aa		4.06	□□□□□ -1.76
GCD1	YOR260W	CIR2	Q08822	631 aa		4.06	□□□□□ -1.76
GCD1	YOR260W	HSP33	Q08914	237 aa	Known RBP	4.06	□□□□□ -1.76
GCD1	YOR260W	HSP32	Q08992	237 aa		4.06	□□□□□ -1.76
GCD1	YOR260W	LAM4	P38800	1345 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	GDB1	Q06625	1536 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	PHO5	P00635	467 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	BUD14	P27637	709 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	STB6	P36085	766 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	YDR089W	P38966	869 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	PUG1	P40100	303 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	YGR067C	P53243	804 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	ART5	P53244	586 aa	Known RBP	4.05	□□□□□ -1.76
GCD1	YOR260W	VPS75	P53853	264 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	RTN1	Q04947	295 aa	Known RBP	4.05	□□□□□ -1.76
GCD1	YOR260W	THI7	Q05998	598 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	YLR456W	Q06199	204 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	MRI1	Q06489	411 aa	Known RBP	4.05	□□□□□ -1.76
GCD1	YOR260W	RKI1	Q12189	258 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	GRX6	Q12438	231 aa		4.05	□□□□□ -1.76
GCD1	YOR260W	GEA2	P39993	1459 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	TDH1	P00360	332 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	LEU2	P04173	364 aa	Predicted RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	ADE3	P07245	946 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	MDM10	P18409	493 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
GCD1	YOR260W	PRP22	P24384	1145 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	DGR2	P32330	852 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	APL3	P38065	1025 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	APM3	P38153	483 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	EHT1	P38295	451 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	PSD1	P39006	500 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	PMT6	P42934	759 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	ROK1	P45818	564 aa	Predicted RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	PUS4	P48567	403 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	YDL183C	P48569	320 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	CTF18	P49956	741 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	DIP5	P53388	608 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	PDR16	P53860	351 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	REG1	Q00816	1014 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	MRPL13	Q02204	264 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	RSM28	Q03430	361 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	MSC3	Q05812	728 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	CRN1	Q06440	651 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	BUD3	P25558	1636 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	RPL19A	P0CX82	189 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	RPL19B	P0CX83	189 aa	Predicted RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	UNG1	P12887	359 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	STE12	P13574	688 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	ARO3	P14843	370 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	CDC42	P19073	191 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	VPS34	P22543	875 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	CLB1	P24868	471 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	PHO91	P27514	894 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	RMA1	P36001	430 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	MTW1	P39731	289 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	EAF5	P39995	279 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	ARF3	P40994	183 aa	RIP-Chip data	4.04	□□□□□ -1.76	not detected
GCD1	YOR260W	BPL1	P48445	690 aa	Predicted RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	HSH155	P49955	971 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	KTR6	P54070	446 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	RPM2	Q02773	1202 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	MRPS17	Q03246	237 aa	Predicted RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	PPN1	Q04119	674 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	NNT1	Q05874	261 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	TSR1	Q07381	788 aa	Known RBP	4.04	□□□□□ -1.76
GCD1	YOR260W	TLG2	Q08144	397 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	RBD2	Q12270	262 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	HER1	Q12276	1246 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	GPM3	Q12326	303 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	GIS3	Q12418	502 aa		4.04	□□□□□ -1.76
GCD1	YOR260W	ARO1	P08566	1588 aa	Known RBP	4.03	□□□□□ -1.76
GCD1	YOR260W	NUC1	P08466	329 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	RAP1	P11938	827 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	KSS1	P14681	368 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	PMA2	P19657	947 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	FAR1	P21268	830 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	PRD1	P25375	712 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	MSP1	P28737	362 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	MRX6	P48564	524 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	LCL3	P53153	274 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	DUO1	P53168	247 aa	Known RBP	4.03	□□□□□ -1.76
GCD1	YOR260W	FCP1	Q03254	732 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	URC2	Q04411	772 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	HOF1	Q05080	669 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	FMP45	Q07651	309 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	SLK19	Q08581	821 aa	Known RBP	4.03	□□□□□ -1.76
GCD1	YOR260W	OSW1	Q08692	278 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	NUR1	Q12066	484 aa		4.03	□□□□□ -1.76
GCD1	YOR260W	GET3	Q12154	354 aa	Known RBP	4.03	□□□□□ -1.76
GCD1	YOR260W	RTC1	Q08281	1341 aa		4.03	□□□□□ -1.77
GCD1	YOR260W	GCN4	P03069	281 aa		4.02	□□□□□ -1.77
GCD1	YOR260W	SIP3	P38717	1229 aa		4.02	□□□□□ -1.77
GCD1	YOR260W	SMF2	P38778	549 aa		4.02	□□□□□ -1.77
GCD1	YOR260W	YHR054C	P38780	354 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms