RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W MHF1Q3E835 90 aa5.89□□□□□ -1.47
VPS5YOR069W ERG20P08524 352 aaKnown RBP5.88□□□□□ -1.47
VPS5YOR069W CAP2P13517 287 aa5.88□□□□□ -1.47
VPS5YOR069W ATP12P22135 325 aa5.88□□□□□ -1.47
VPS5YOR069W DBR1P24309 405 aaKnown RBP5.88□□□□□ -1.47
VPS5YOR069W YCR090CP25654 182 aaKnown RBP5.88□□□□□ -1.47
VPS5YOR069W PAH1P32567 862 aa5.88□□□□□ -1.47
VPS5YOR069W YKL100CP34248 587 aa5.88□□□□□ -1.47
VPS5YOR069W NAT2P37293 288 aa5.88□□□□□ -1.47
VPS5YOR069W NMD3P38861 518 aaKnown RBP5.88□□□□□ -1.47
VPS5YOR069W SPF1P39986 1215 aaKnown RBP5.88□□□□□ -1.47
VPS5YOR069W TPA1P40032 644 aaKnown RBP5.88□□□□□ -1.47
VPS5YOR069W YER137CP40083 148 aaKnown RBP5.88□□□□□ -1.47
VPS5YOR069W SEC28P40509 296 aaKnown RBP5.88□□□□□ -1.47
VPS5YOR069W MPS3P47069 682 aa5.88□□□□□ -1.47
VPS5YOR069W BIO3P50277 480 aa5.88□□□□□ -1.47
VPS5YOR069W MET13P53128 600 aa5.88□□□□□ -1.47
VPS5YOR069W CPR8P53728 308 aa5.88□□□□□ -1.47
VPS5YOR069W TOF2Q02208 771 aa5.88□□□□□ -1.47
VPS5YOR069W PML39Q03760 334 aa5.88□□□□□ -1.47
VPS5YOR069W RAD33Q04231 177 aa5.88□□□□□ -1.47
VPS5YOR069W ECM38Q05902 660 aaPredicted RBP5.88□□□□□ -1.47
VPS5YOR069W YLR031WQ07978 186 aa5.88□□□□□ -1.47
VPS5YOR069W MSC6Q08818 692 aaKnown RBP5.88□□□□□ -1.47
VPS5YOR069W YPL247CQ12523 523 aa5.88□□□□□ -1.47
VPS5YOR069W TSC13Q99190 310 aa5.88□□□□□ -1.47
VPS5YOR069W UBR2Q07963 1872 aa5.88□□□□□ -1.47
VPS5YOR069W TIM9O74700 87 aa5.87□□□□□ -1.47
VPS5YOR069W URA3P03962 267 aa5.87□□□□□ -1.47
VPS5YOR069W ASP3-2P0CX77 362 aa5.87□□□□□ -1.47
VPS5YOR069W ASP3-3P0CX78 362 aa5.87□□□□□ -1.47
VPS5YOR069W ASP3-4P0CX79 362 aa5.87□□□□□ -1.47
VPS5YOR069W ASP3-1P0CZ17 362 aa5.87□□□□□ -1.47
VPS5YOR069W YAP1P19880 650 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W TGL1P34163 548 aa5.87□□□□□ -1.47
VPS5YOR069W NOP4P37838 685 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W KTR4P38131 464 aa5.87□□□□□ -1.47
VPS5YOR069W MNN9P39107 395 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W MTW1P39731 289 aa5.87□□□□□ -1.47
VPS5YOR069W YEN1P40028 759 aa5.87□□□□□ -1.47
VPS5YOR069W SER2P42941 309 aa5.87□□□□□ -1.47
VPS5YOR069W GUF1P46943 645 aa5.87□□□□□ -1.47
VPS5YOR069W BPL1P48445 690 aaPredicted RBP5.87□□□□□ -1.47
VPS5YOR069W RIM21P48565 533 aa5.87□□□□□ -1.47
VPS5YOR069W MTC3P53077 123 aa5.87□□□□□ -1.47
VPS5YOR069W GRX5Q02784 150 aa5.87□□□□□ -1.47
VPS5YOR069W INA17Q02888 182 aa5.87□□□□□ -1.47
VPS5YOR069W DLT1Q04216 342 aa5.87□□□□□ -1.47
VPS5YOR069W RQC1Q05468 723 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W NEJ1Q06148 342 aa5.87□□□□□ -1.47
VPS5YOR069W DCS1Q06151 350 aa5.87□□□□□ -1.47
VPS5YOR069W VPS36Q06696 566 aa5.87□□□□□ -1.47
VPS5YOR069W GUD1Q07729 489 aa5.87□□□□□ -1.47
VPS5YOR069W FRT1Q99332 602 aa5.87□□□□□ -1.47
VPS5YOR069W RED1P14291 827 aa5.87□□□□□ -1.47
VPS5YOR069W DIT1P21623 536 aa5.87□□□□□ -1.47
VPS5YOR069W YCK2P23292 546 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W BUB2P26448 306 aaPredicted RBP5.87□□□□□ -1.47
VPS5YOR069W SPT14P32363 452 aa5.87□□□□□ -1.47
VPS5YOR069W ARP2P32381 391 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W MRS6P32864 603 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W ARA1P38115 344 aa5.87□□□□□ -1.47
VPS5YOR069W SEA4P38164 1038 aa5.87□□□□□ -1.47
VPS5YOR069W FMP23P38231 175 aa5.87□□□□□ -1.47
VPS5YOR069W VID24P38263 362 aa5.87□□□□□ -1.47
VPS5YOR069W SRP72P38688 640 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W LSM12P38828 187 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W EAF5P39995 279 aa5.87□□□□□ -1.47
VPS5YOR069W GCD10P41814 478 aa5.87□□□□□ -1.47
VPS5YOR069W YJR154WP47181 346 aa5.87□□□□□ -1.47
VPS5YOR069W RMI1Q02685 241 aa5.87□□□□□ -1.47
VPS5YOR069W PFA5Q03289 374 aa5.87□□□□□ -1.47
VPS5YOR069W SUB2Q07478 446 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W DIS3Q08162 1001 aaKnown RBP5.87□□□□□ -1.47
VPS5YOR069W RBD2Q12270 262 aa5.87□□□□□ -1.47
VPS5YOR069W MDY2Q12285 212 aa5.87□□□□□ -1.47
VPS5YOR069W YPR1Q12458 312 aa5.87□□□□□ -1.47
VPS5YOR069W ATP1P07251 545 aaKnown RBP5.86□□□□□ -1.47
VPS5YOR069W COS2P0CX12 379 aa5.86□□□□□ -1.47
VPS5YOR069W COS3P0CX13 379 aa5.86□□□□□ -1.47
VPS5YOR069W YCL049CP25577 312 aa5.86□□□□□ -1.47
VPS5YOR069W COQ8P27697 501 aa5.86□□□□□ -1.47
VPS5YOR069W CIN8P27895 1000 aa5.86□□□□□ -1.47
VPS5YOR069W SYN8P31377 255 aa5.86□□□□□ -1.47
VPS5YOR069W AIM26P32858 118 aa5.86□□□□□ -1.47
VPS5YOR069W TAF14P35189 244 aa5.86□□□□□ -1.47
VPS5YOR069W LRG1P35688 1017 aa5.86□□□□□ -1.47
VPS5YOR069W MRPL17P36528 281 aa5.86□□□□□ -1.47
VPS5YOR069W ABZ1P37254 787 aaPredicted RBP5.86□□□□□ -1.47
VPS5YOR069W HSL7P38274 827 aa5.86□□□□□ -1.47
VPS5YOR069W SRP68P38687 599 aaKnown RBP5.86□□□□□ -1.47
VPS5YOR069W PPE1P38796 400 aa5.86□□□□□ -1.47
VPS5YOR069W NAB3P38996 802 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
VPS5YOR069W XDJ1P39102 459 aa5.86□□□□□ -1.47
VPS5YOR069W YKE4P40544 346 aa5.86□□□□□ -1.47
VPS5YOR069W LYS4P49367 693 aaPredicted RBP5.86□□□□□ -1.47
VPS5YOR069W ALT2P52892 507 aa5.86□□□□□ -1.47
VPS5YOR069W GTR2P53290 341 aa5.86□□□□□ -1.47
VPS5YOR069W PRP38Q00723 242 aaPredicted RBP5.86□□□□□ -1.47
VPS5YOR069W NGL2Q03264 515 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms