RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C HOM2P13663 365 aaKnown RBP10.57□□□□□ -0.72
VPS60YDR486C GUK1P15454 187 aaKnown RBP10.57□□□□□ -0.72
VPS60YDR486C CCR4P31384 837 aaKnown RBP10.57□□□□□ -0.72
VPS60YDR486C YPT52P36018 234 aaKnown RBP10.57□□□□□ -0.72
VPS60YDR486C GIP1P38229 639 aa10.57□□□□□ -0.72
VPS60YDR486C UTP9P38882 575 aaKnown RBP10.57□□□□□ -0.72
VPS60YDR486C LSM5P40089 93 aaKnown RBP10.57□□□□□ -0.72
VPS60YDR486C UTP18P40362 594 aaPredicted RBP10.57□□□□□ -0.72
VPS60YDR486C YJR154WP47181 346 aa10.57□□□□□ -0.72
VPS60YDR486C COQ5P49017 307 aa10.57□□□□□ -0.72
VPS60YDR486C GTR2P53290 341 aa10.57□□□□□ -0.72
VPS60YDR486C TGL2P54857 326 aa10.57□□□□□ -0.72
VPS60YDR486C UBP2Q01476 1272 aa10.57□□□□□ -0.72
VPS60YDR486C YML131WQ03102 365 aa10.57□□□□□ -0.72
VPS60YDR486C YPL225WQ08971 146 aaKnown RBP10.57□□□□□ -0.72
VPS60YDR486C TRM8Q12009 286 aa10.57□□□□□ -0.72
VPS60YDR486C PST1Q12355 444 aa10.57□□□□□ -0.72
VPS60YDR486C NAG1Q8TGN9 163 aa10.57□□□□□ -0.72
VPS60YDR486C VPS34P22543 875 aa10.56□□□□□ -0.72
VPS60YDR486C YSR3P23501 404 aa10.56□□□□□ -0.72
VPS60YDR486C ATP11P32453 318 aa10.56□□□□□ -0.72
VPS60YDR486C CAB3P36076 571 aa10.56□□□□□ -0.72
VPS60YDR486C TCD2P36101 447 aaKnown RBP10.56□□□□□ -0.72
VPS60YDR486C HXT5P38695 592 aa10.56□□□□□ -0.72
VPS60YDR486C NPT1P39683 429 aaKnown RBP10.56□□□□□ -0.72
VPS60YDR486C STB2P46679 850 aa10.56□□□□□ -0.72
VPS60YDR486C NOP19P53317 196 aaPredicted RBP10.56□□□□□ -0.72
VPS60YDR486C SNO2P53823 222 aa10.56□□□□□ -0.72
VPS60YDR486C CUS2P53830 285 aaPredicted RBP10.56□□□□□ -0.72
VPS60YDR486C NIS1P53939 407 aa10.56□□□□□ -0.72
VPS60YDR486C SPC24Q04477 213 aa10.56□□□□□ -0.72
VPS60YDR486C ARG7Q04728 441 aa10.56□□□□□ -0.72
VPS60YDR486C YDR338CQ05497 695 aa10.56□□□□□ -0.72
VPS60YDR486C CAR1P00812 333 aaKnown RBP10.55□□□□□ -0.72
VPS60YDR486C INH1P01097 85 aa10.55□□□□□ -0.72
VPS60YDR486C SWI5P08153 709 aa10.55□□□□□ -0.72
VPS60YDR486C FUM1P08417 488 aaKnown RBP10.55□□□□□ -0.72
VPS60YDR486C RAD14P28519 371 aa10.55□□□□□ -0.72
VPS60YDR486C SPR1P32603 445 aa10.55□□□□□ -0.72
VPS60YDR486C YKL100CP34248 587 aa10.55□□□□□ -0.72
VPS60YDR486C RPF2P36160 344 aaKnown RBP10.55□□□□□ -0.72
VPS60YDR486C LGE1Q02796 332 aaKnown RBP10.55□□□□□ -0.72
VPS60YDR486C BCH1Q05029 724 aa10.55□□□□□ -0.72
VPS60YDR486C HEL2Q05580 639 aaKnown RBP10.55□□□□□ -0.72
VPS60YDR486C GLO2Q05584 274 aa10.55□□□□□ -0.72
VPS60YDR486C FAR10Q06001 478 aa10.55□□□□□ -0.72
VPS60YDR486C GPB1Q08886 897 aa10.55□□□□□ -0.72
VPS60YDR486C VPS68Q12016 184 aa10.55□□□□□ -0.72
VPS60YDR486C YLR049CQ12110 428 aa10.55□□□□□ -0.72
VPS60YDR486C MCD1Q12158 566 aa10.55□□□□□ -0.72
VPS60YDR486C BEM2P39960 2167 aaKnown RBP10.55□□□□□ -0.72
VPS60YDR486C TUB1P09733 447 aaKnown RBP10.54□□□□□ -0.72
VPS60YDR486C SPT15P13393 240 aaKnown RBP10.54□□□□□ -0.72
VPS60YDR486C PMR1P13586 950 aa10.54□□□□□ -0.72
VPS60YDR486C MET8P15807 274 aa10.54□□□□□ -0.72
VPS60YDR486C POL30P15873 258 aaKnown RBP10.54□□□□□ -0.72
VPS60YDR486C HCM1P25364 564 aa10.54□□□□□ -0.72
VPS60YDR486C GFD2P25370 566 aaKnown RBP10.54□□□□□ -0.72
VPS60YDR486C CIN8P27895 1000 aa10.54□□□□□ -0.72
VPS60YDR486C PDB1P32473 366 aaKnown RBP10.54□□□□□ -0.72
VPS60YDR486C SDH3P33421 198 aa10.54□□□□□ -0.72
VPS60YDR486C CCT6P39079 546 aa10.54□□□□□ -0.72
VPS60YDR486C SCS2P40075 244 aaKnown RBP10.54□□□□□ -0.72
VPS60YDR486C USE1P53146 245 aa10.54□□□□□ -0.72
VPS60YDR486C ZRG17P53735 605 aa10.54□□□□□ -0.72
VPS60YDR486C YNL010WP53981 241 aaKnown RBP10.54□□□□□ -0.72
VPS60YDR486C REX2P54964 269 aaKnown RBP10.54□□□□□ -0.72
VPS60YDR486C GTR1Q00582 310 aa10.54□□□□□ -0.72
VPS60YDR486C YPL113CQ02961 396 aa10.54□□□□□ -0.72
VPS60YDR486C YPL109CQ02981 657 aa10.54□□□□□ -0.72
VPS60YDR486C JIP5Q06214 492 aaPredicted RBP10.54□□□□□ -0.72
VPS60YDR486C ESA1Q08649 445 aa10.54□□□□□ -0.72
VPS60YDR486C RRP36Q12481 300 aaPredicted RBP10.54□□□□□ -0.72
VPS60YDR486C TRP3P00937 484 aa10.53□□□□□ -0.72
VPS60YDR486C SPT3P06844 337 aa10.53□□□□□ -0.72
VPS60YDR486C RSR1P13856 272 aa10.53□□□□□ -0.72
VPS60YDR486C YCK2P23292 546 aaKnown RBP10.53□□□□□ -0.72
VPS60YDR486C SIS1P25294 352 aaKnown RBP10.53□□□□□ -0.72
VPS60YDR486C BUB2P26448 306 aaPredicted RBP10.53□□□□□ -0.72
VPS60YDR486C SLX5P32828 619 aaKnown RBP10.53□□□□□ -0.72
VPS60YDR486C SOL2P37262 315 aa10.53□□□□□ -0.72
VPS60YDR486C GIP4P39732 760 aa10.53□□□□□ -0.72
VPS60YDR486C FRT2P39734 528 aa10.53□□□□□ -0.72
VPS60YDR486C YEL073CP39974 107 aa10.53□□□□□ -0.72
VPS60YDR486C EMP65P40085 556 aa10.53□□□□□ -0.72
VPS60YDR486C FKH2P41813 862 aa10.53□□□□□ -0.72
VPS60YDR486C BIR1P47134 954 aa10.53□□□□□ -0.72
VPS60YDR486C ECM9Q02202 377 aa10.53□□□□□ -0.72
VPS60YDR486C YET2Q04210 160 aa10.53□□□□□ -0.72
VPS60YDR486C GRS2Q06817 618 aa10.53□□□□□ -0.72
VPS60YDR486C YEH2Q07950 538 aa10.53□□□□□ -0.72
VPS60YDR486C DIA2Q08496 732 aaPredicted RBP10.53□□□□□ -0.72
VPS60YDR486C COS2P0CX12 379 aa10.52□□□□□ -0.73
VPS60YDR486C COS3P0CX13 379 aa10.52□□□□□ -0.73
VPS60YDR486C PRP6P19735 899 aaPredicted RBP10.52□□□□□ -0.73
VPS60YDR486C CLN2P20438 545 aa10.52□□□□□ -0.73
VPS60YDR486C RPS1AP33442 255 aaKnown RBP10.52□□□□□ -0.73
VPS60YDR486C PTC1P35182 281 aa10.52□□□□□ -0.73
VPS60YDR486C YHL008CP38750 627 aa10.52□□□□□ -0.73
VPS60YDR486C UBA4P38820 440 aa10.52□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms