RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
ATG12	YBR217W	ASK1	P35734	292 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	MUP3	P38734	546 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	HSE1	P38753	452 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	UBA4	P38820	440 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	SGF73	P53165	657 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	CLD1	P53264	445 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	NRM1	P53718	249 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	NAM8	Q00539	523 aa	Known RBP	5.7	□□□□□ -1.5
ATG12	YBR217W	CTK1	Q03957	528 aa	Known RBP	5.7	□□□□□ -1.5
ATG12	YBR217W	STE23	Q06010	1027 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	GRS2	Q06817	618 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	YLR053C	Q12026	108 aa		5.7	□□□□□ -1.5
ATG12	YBR217W	HRP1	Q99383	534 aa	Known RBP	5.7	□□□□□ -1.5
ATG12	YBR217W	COX6	P00427	148 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
ATG12	YBR217W	CLN2	P20438	545 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	AMD2	P22580	549 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	CWP1	P28319	239 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	PHA2	P32452	334 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	SPT16	P32558	1035 aa	Known RBP	5.69	□□□□□ -1.5
ATG12	YBR217W	YPT52	P36018	234 aa	Known RBP	5.69	□□□□□ -1.5
ATG12	YBR217W	MUD2	P36084	527 aa	Known RBP	5.69	□□□□□ -1.5
ATG12	YBR217W	MRPL37	P36532	105 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	ARA1	P38115	344 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	PHO89	P38361	574 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	REV7	P38927	245 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	SPF1	P39986	1215 aa	Known RBP	5.69	□□□□□ -1.5
ATG12	YBR217W	SEC28	P40509	296 aa	Known RBP	5.69	□□□□□ -1.5
ATG12	YBR217W	LSC1	P53598	329 aa	Known RBP	5.69	□□□□□ -1.5
ATG12	YBR217W	EGD1	Q02642	157 aa	Known RBP	5.69	□□□□□ -1.5
ATG12	YBR217W	YMR155W	Q03795	547 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	HPT1	Q04178	221 aa	Known RBP	5.69	□□□□□ -1.5
ATG12	YBR217W	TAF11	Q04226	346 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	SPO20	Q04359	397 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	SFH1	Q06168	426 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	VHS3	Q08438	674 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	MDY2	Q12285	212 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	STB3	Q12427	513 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	YPL247C	Q12523	523 aa		5.69	□□□□□ -1.5
ATG12	YBR217W	NUM1	Q00402	2748 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	PRP16	P15938	1071 aa	Predicted RBP	5.68	□□□□□ -1.5
ATG12	YBR217W	RPB4	P20433	221 aa	Predicted RBP	5.68	□□□□□ -1.5
ATG12	YBR217W	YCK2	P23292	546 aa	Known RBP	5.68	□□□□□ -1.5
ATG12	YBR217W	MEI5	P32489	222 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	MGM101	P32787	269 aa	Known RBP	5.68	□□□□□ -1.5
ATG12	YBR217W	DOM34	P33309	386 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	NUP120	P35729	1037 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	OAF3	P36023	863 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	NTR2	P36118	322 aa	Predicted RBP	5.68	□□□□□ -1.5
ATG12	YBR217W	SOL2	P37262	315 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	YHR045W	P38775	560 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	YHR127W	P38833	243 aa	Known RBP	5.68	□□□□□ -1.5
ATG12	YBR217W	LYS1	P38998	373 aa	RIP-Chip data	5.68	□□□□□ -1.5	not detected
ATG12	YBR217W	OAF1	P39720	1047 aa	Predicted RBP	5.68	□□□□□ -1.5
ATG12	YBR217W	CFD1	P40558	293 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	YFR020W	P43600	232 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	GCV1	P48015	400 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	NHP10	Q03435	203 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	UTP13	Q05946	817 aa	Known RBP	5.68	□□□□□ -1.5
ATG12	YBR217W	APC9	Q12107	265 aa		5.68	□□□□□ -1.5
ATG12	YBR217W	HSH49	Q99181	213 aa	Predicted RBP	5.68	□□□□□ -1.5
ATG12	YBR217W	GAL4	P04386	881 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	MET8	P15807	274 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	CLB1	P24868	471 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	PET309	P32522	965 aa	Predicted RBP	5.67	□□□□□ -1.5
ATG12	YBR217W	SDH3	P33421	198 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	SKT5	P34226	696 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	SET3	P36124	751 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	VRP1	P37370	817 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	TRM7	P38238	310 aa	Known RBP	5.67	□□□□□ -1.5
ATG12	YBR217W	YBR238C	P38330	731 aa	Known RBP	5.67	□□□□□ -1.5
ATG12	YBR217W	NPT1	P39683	429 aa	Known RBP	5.67	□□□□□ -1.5
ATG12	YBR217W	MEP1	P40260	492 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	PRM2	P40534	656 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	YRB1	P41920	201 aa	Known RBP	5.67	□□□□□ -1.5
ATG12	YBR217W	STB2	P46679	850 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	GCD14	P46959	383 aa	Predicted RBP	5.67	□□□□□ -1.5
ATG12	YBR217W	MPS2	P53159	387 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	YGR015C	P53208	328 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	ARE2	P53629	642 aa	Known RBP	5.67	□□□□□ -1.5
ATG12	YBR217W	UBX4	P54730	416 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	STP3	Q05937	343 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	TDA5	Q06417	326 aa	Known RBP	5.67	□□□□□ -1.5
ATG12	YBR217W	VAM6	Q07468	1049 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	YDR056C	Q12025	205 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	YDR262W	Q12331	272 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	YKL068W-A	Q3E826	78 aa		5.67	□□□□□ -1.5
ATG12	YBR217W	GUK1	P15454	187 aa	Known RBP	5.66	□□□□□ -1.5
ATG12	YBR217W	TEC1	P18412	486 aa		5.66	□□□□□ -1.5
ATG12	YBR217W	CDC13	P32797	924 aa	Known RBP	5.66	□□□□□ -1.5
ATG12	YBR217W	EMC3	P36039	253 aa		5.66	□□□□□ -1.5
ATG12	YBR217W	RRN3	P36070	627 aa		5.66	□□□□□ -1.5
ATG12	YBR217W	LEU5	P38702	357 aa		5.66	□□□□□ -1.5
ATG12	YBR217W	INM1	P38710	295 aa		5.66	□□□□□ -1.5
ATG12	YBR217W	GIC1	P38785	314 aa		5.66	□□□□□ -1.5
ATG12	YBR217W	LIN1	P38852	340 aa	Predicted RBP	5.66	□□□□□ -1.5
ATG12	YBR217W	YDR089W	P38966	869 aa		5.66	□□□□□ -1.5
ATG12	YBR217W	UME6	P39001	836 aa		5.66	□□□□□ -1.5
ATG12	YBR217W	PLB1	P39105	664 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms