RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PALM2Q8IXS6 379 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 DEPTORQ8TB45 409 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 CCHCR1Q8TD31 782 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 U2AF1L4Q8WU68 220 aaKnown RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 ZNF594Q96JF6 807 aaPredicted RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 NACA2Q9H009 215 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 TPCN1Q9ULQ1 816 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 CARMIL3Q8ND23 1372 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 PPP6R2O75170 966 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 SCG2P13521 617 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 ATF2P15336 505 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 TNNI1P19237 187 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 EEF1GP26641 437 aaKnown RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 RNASE9P60153 205 aaKnown RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 SPATA1Q5VX52 437 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 NEK8Q86SG6 692 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 EXOC8Q8IYI6 725 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 ZBTB38Q8NAP3 1195 aaPredicted RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 GBP5Q96PP8 586 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 TRIM31Q9BZY9 425 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 FOXP1Q9H334 677 aaPredicted RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 HAUS4Q9H6D7 363 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 PSTPIP2Q9H939 334 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 THEGQ9P2T0 379 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 COL4A3BPQ9Y5P4 624 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 ADGRL3Q9HAR2 1447 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 POLR2MP0CAP2 368 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 RNASELQ05823 741 aaKnown RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 LRRC8AQ8IWT6 810 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 TPH2Q8IWU9 490 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 CALR3Q96L12 384 aaKnown RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 ARMCX3Q9UH62 379 aaPredicted RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 NR1I2O75469 434 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 AOC3Q16853 763 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 MUM1Q2TAK8 710 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 TRIM42Q8IWZ5 723 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 CAPS2Q9BXY5 557 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 FAM207AQ9NSI2 230 aaPredicted RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 RTEL1Q9NZ71 1219 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 KCNJ14Q9UNX9 436 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 K7ENM7 598 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 KCNA6P17658 529 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 ZAP70P43403 619 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 DHTKD1Q96HY7 919 aaPredicted RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 BLZF1Q9H2G9 400 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 TMEM2Q9UHN6 1383 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 CLTCL1P53675 1640 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 JAK2O60674 1132 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 FAM160B1Q5W0V3 765 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 CABLES1Q8TDN4 633 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 RABGGTAQ92696 567 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.01□□□□□ -1.613e-7■■■■■ 34.2
CHD9-221ENST00000615216 SERTAD1Q9UHV2 236 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 KDM6BO15054 1643 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 CAMSAP1Q5T5Y3 1602 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 PALM3A6NDB9 673 aaPredicted RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 SEPT2Q15019 361 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 ASPRV1Q53RT3 343 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 FAM102BQ5T8I3 360 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 DCAF15Q66K64 600 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 RILPQ96NA2 401 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 IFT122Q9HBG6 1241 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 KRT19P08727 400 aa5□□□□□ -1.61
CHD9-221ENST00000615216 SRGAP2BP0DMP2 458 aa5□□□□□ -1.61
CHD9-221ENST00000615216 STMN1P16949 149 aa5□□□□□ -1.61
CHD9-221ENST00000615216 POLR2BP30876 1174 aaKnown RBP5□□□□□ -1.61
CHD9-221ENST00000615216 PRPSAP1Q14558 356 aa5□□□□□ -1.61
CHD9-221ENST00000615216 PLCB4Q15147 1175 aa5□□□□□ -1.61
CHD9-221ENST00000615216 FLAD1Q8NFF5 587 aa5□□□□□ -1.61
CHD9-221ENST00000615216 BIN2Q9UBW5 565 aaPredicted RBP5□□□□□ -1.61
CHD9-221ENST00000615216 NCKAP5LQ9HCH0 1330 aa5□□□□□ -1.61
CHD9-221ENST00000615216 DDX39AO00148 427 aaKnown RBP5□□□□□ -1.61
CHD9-221ENST00000615216 KCNK3O14649 394 aa5□□□□□ -1.61
CHD9-221ENST00000615216 FOSP01100 380 aaPredicted RBP5□□□□□ -1.61
CHD9-221ENST00000615216 ADCY8P40145 1251 aa5□□□□□ -1.61
CHD9-221ENST00000615216 PIK3CAP42336 1068 aa5□□□□□ -1.61
CHD9-221ENST00000615216 TCIRG1Q13488 830 aa5□□□□□ -1.61
CHD9-221ENST00000615216 LONRF3Q496Y0 759 aa5□□□□□ -1.61
CHD9-221ENST00000615216 DYMQ7RTS9 669 aa5□□□□□ -1.61
CHD9-221ENST00000615216 TEKT3Q9BXF9 490 aa5□□□□□ -1.61
CHD9-221ENST00000615216 GPR108Q9NPR9 543 aa5□□□□□ -1.61
CHD9-221ENST00000615216 LARSQ9P2J5 1176 aaKnown RBP5□□□□□ -1.61
CHD9-221ENST00000615216 STK17AQ9UEE5 414 aa5□□□□□ -1.61
CHD9-221ENST00000615216 ERVK-7P63135 1459 aa5□□□□□ -1.61
CHD9-221ENST00000615216 ATP2B4P23634 1241 aa5□□□□□ -1.61
CHD9-221ENST00000615216 LIG4P49917 911 aa5□□□□□ -1.61
CHD9-221ENST00000615216 MYL7Q01449 175 aa5□□□□□ -1.61
CHD9-221ENST00000615216 TFAP4Q01664 338 aa5□□□□□ -1.61
CHD9-221ENST00000615216 CNOT10Q9H9A5 744 aaKnown RBP5□□□□□ -1.61
CHD9-221ENST00000615216 POLR3EQ9NVU0 708 aa5□□□□□ -1.61
CHD9-221ENST00000615216 LCMT1Q9UIC8 334 aa5□□□□□ -1.61
CHD9-221ENST00000615216 UGGT1Q9NYU2 1555 aa5□□□□□ -1.61
CHD9-221ENST00000615216 RAD51AP2Q09MP3 1159 aa5□□□□□ -1.61
CHD9-221ENST00000615216 PABPC4Q13310 644 aaKnown RBP eCLIP5□□□□□ -1.61
CHD9-221ENST00000615216 CCDC170Q8IYT3 715 aa5□□□□□ -1.61
CHD9-221ENST00000615216 GADD45GIP1Q8TAE8 222 aaPredicted RBP5□□□□□ -1.61
CHD9-221ENST00000615216 MAGI3Q5TCQ9 1506 aa5□□□□□ -1.61
CHD9-221ENST00000615216 LPXNO60711 386 aa5□□□□□ -1.61
CHD9-221ENST00000615216 ADKP55263 362 aaKnown RBP5□□□□□ -1.61
CHD9-221ENST00000615216 PPP2R5AQ15172 486 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms