RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 OSBPP22059 807 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 TMOD1P28289 359 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 CFAP221Q4G0U5 840 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 PEX26Q7Z412 305 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 AMNQ9BXJ7 453 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 CD2APQ9Y5K6 639 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 LRRIQ4A6NIV6 560 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 DMP1Q13316 513 aaPredicted RBP17.21■□□□□ 0.35
TNXB-208ENST00000611016 CASC4Q6P4E1 433 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 TRIML1Q8N9V2 468 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 U2AF1L4Q8WU68 220 aaKnown RBP17.21■□□□□ 0.35
TNXB-208ENST00000611016 CYP4A11Q02928 519 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 SUPT20HL1Q3ZLR7 823 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 TBC1D31Q96DN5 1066 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 USP28Q96RU2 1077 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 M0R2C6 588 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 CCNA1P78396 465 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 CACNA2D3Q8IZS8 1091 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 VPS52Q8N1B4 723 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 GPR108Q9NPR9 543 aa17.21■□□□□ 0.35
TNXB-208ENST00000611016 RRAGDQ9NQL2 400 aaPredicted RBP17.21■□□□□ 0.35
TNXB-208ENST00000611016 TTLL1O95922 423 aa17.21■□□□□ 0.34
TNXB-208ENST00000611016 RPS6KA1Q15418 735 aa17.21■□□□□ 0.34
TNXB-208ENST00000611016 CC2D2BQ6DHV5 1058 aa17.21■□□□□ 0.34
TNXB-208ENST00000611016 NLRP10Q86W26 655 aa17.21■□□□□ 0.34
TNXB-208ENST00000611016 NBPF3Q9H094 633 aa17.21■□□□□ 0.34
TNXB-208ENST00000611016 RTEL1Q9NZ71 1219 aa17.21■□□□□ 0.34
TNXB-208ENST00000611016 ERBB3P21860 1342 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 ATP7BP35670 1465 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 HPDP32754 393 aaPredicted RBP17.2■□□□□ 0.34
TNXB-208ENST00000611016 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 CCDC105Q8IYK2 499 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 PIGBQ92521 554 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 DLATP10515 647 aaKnown RBP17.2■□□□□ 0.34
TNXB-208ENST00000611016 ATF7P17544 494 aaPredicted RBP17.2■□□□□ 0.34
TNXB-208ENST00000611016 STAT1P42224 750 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 BIRC2Q13490 618 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 MAGEF1Q9HAY2 307 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 PDIA3P30101 505 aaKnown RBP17.2■□□□□ 0.34
TNXB-208ENST00000611016 USP14P54578 494 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 IFRD2Q12894 506 aaPredicted RBP17.2■□□□□ 0.34
TNXB-208ENST00000611016 MORC3Q14149 939 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 RAB17Q9H0T7 212 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 FOSP01100 380 aaPredicted RBP17.2■□□□□ 0.34
TNXB-208ENST00000611016 ZMYM1Q5SVZ6 1142 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 ANKFY1Q9P2R3 1169 aa17.2■□□□□ 0.34
TNXB-208ENST00000611016 VIMP08670 466 aaKnown RBP17.19■□□□□ 0.34
TNXB-208ENST00000611016 MIS12Q9H081 205 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 PFDN4Q9NQP4 134 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 PPFIA1Q13136 1202 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 PPP2R5CQ13362 524 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 ARMCX5Q6P1M9 558 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 COL4A3BPQ9Y5P4 624 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 HOXA7P31268 230 aaPredicted RBP17.19■□□□□ 0.34
TNXB-208ENST00000611016 KIF11P52732 1056 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 ASPRV1Q53RT3 343 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 DALRD3Q5D0E6 543 aaKnown RBP17.19■□□□□ 0.34
TNXB-208ENST00000611016 GPATCH4Q5T3I0 446 aaKnown RBP17.19■□□□□ 0.34
TNXB-208ENST00000611016 P3H4Q92791 437 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 CLIC6Q96NY7 704 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 IFIH1Q9BYX4 1025 aaKnown RBP17.19■□□□□ 0.34
TNXB-208ENST00000611016 MAGI3Q5TCQ9 1506 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 CAPN9O14815 690 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 ABCB4P21439 1286 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 PTGDRQ13258 359 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 SCYL2Q6P3W7 929 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 CCDC89Q8N998 374 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 SLC39A2Q9NP94 309 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 C1orf112Q9NSG2 853 aa17.19■□□□□ 0.34
TNXB-208ENST00000611016 LARSQ9P2J5 1176 aaKnown RBP17.19■□□□□ 0.34
TNXB-208ENST00000611016 ARMCX3Q9UH62 379 aaPredicted RBP17.19■□□□□ 0.34
TNXB-208ENST00000611016 HMGB1P1B2RPK0 211 aaPredicted RBP17.18■□□□□ 0.34
TNXB-208ENST00000611016 ZWINTO95229 277 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 ARHGAP25P42331 645 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 GPATCH11Q8N954 259 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 BRD1O95696 1058 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 SEPT9Q9UHD8 586 aaPredicted RBP17.18■□□□□ 0.34
TNXB-208ENST00000611016 ANKARQ7Z5J8 1434 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 SLC16A2P36021 539 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 SEPT14Q6ZU15 432 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 ARMC9Q7Z3E5 817 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 CCDC127Q96BQ5 260 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 ANTXR1Q9H6X2 564 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 KIAA1468Q9P260 1216 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 ERVV-1B6SEH8 477 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 TMEM191BP0C7N4 346 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 GBP1P32455 592 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 HSPA1LP34931 641 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 BCAP29Q9UHQ4 241 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 USH1CQ9Y6N9 552 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 HEG1Q9ULI3 1381 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 ADKP55263 362 aaKnown RBP17.18■□□□□ 0.34
TNXB-208ENST00000611016 LRCH2Q5VUJ6 765 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 APOL6Q9BWW8 343 aa17.18■□□□□ 0.34
TNXB-208ENST00000611016 RABGAP1Q9Y3P9 1069 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms