RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 NRBP1Q9UHY1 535 aa16.82■□□□□ 0.28
PRDM16-210ENST00000607632 SMCHD1A6NHR9 2005 aa16.82■□□□□ 0.28
PRDM16-210ENST00000607632 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
PRDM16-210ENST00000607632 ICAM1P05362 532 aa16.81■□□□□ 0.28
PRDM16-210ENST00000607632 TRDNQ13061 729 aa16.81■□□□□ 0.28
PRDM16-210ENST00000607632 IKQ13123 557 aaPredicted RBP16.81■□□□□ 0.28
PRDM16-210ENST00000607632 MAMDC4Q6UXC1 1216 aa16.81■□□□□ 0.28
PRDM16-210ENST00000607632 ZNF467Q7Z7K2 595 aaPredicted RBP16.81■□□□□ 0.28
PRDM16-210ENST00000607632 FGD4Q96M96 766 aa16.81■□□□□ 0.28
PRDM16-210ENST00000607632 AGBL1Q96MI9 1066 aa16.81■□□□□ 0.28
PRDM16-210ENST00000607632 KAT14Q9H8E8 782 aa16.81■□□□□ 0.28
PRDM16-210ENST00000607632 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
PRDM16-210ENST00000607632 LCTP09848 1927 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 WDR19Q8NEZ3 1342 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 MSCO60682 206 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 FARP2O94887 1054 aaPredicted RBP16.8■□□□□ 0.28
PRDM16-210ENST00000607632 TFRCP02786 760 aaKnown RBP16.8■□□□□ 0.28
PRDM16-210ENST00000607632 PGK2P07205 417 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 SLC16A2P36021 539 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 KIAA1211Q6ZU35 1233 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 MB21D2Q8IYB1 491 aaPredicted RBP16.8■□□□□ 0.28
PRDM16-210ENST00000607632 NCOA7Q8NI08 942 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 CHMP4CQ96CF2 233 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 TINF2Q9BSI4 451 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 UBAC1Q9BSL1 405 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 MTA3Q9BTC8 594 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 ACAD9Q9H845 621 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 PCDH10Q9P2E7 1040 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 MTMR7Q9Y216 660 aa16.8■□□□□ 0.28
PRDM16-210ENST00000607632 SYNGAP1Q96PV0 1343 aa16.79■□□□□ 0.28
PRDM16-210ENST00000607632 CDC45O75419 566 aa16.79■□□□□ 0.28
PRDM16-210ENST00000607632 CENPBP07199 599 aaPredicted RBP16.79■□□□□ 0.28
PRDM16-210ENST00000607632 ANTXR2P58335 489 aa16.79■□□□□ 0.28
PRDM16-210ENST00000607632 ASPRV1Q53RT3 343 aa16.79■□□□□ 0.28
PRDM16-210ENST00000607632 GPCPD1Q9NPB8 672 aa16.79■□□□□ 0.28
PRDM16-210ENST00000607632 RNF146Q9NTX7 359 aa16.79■□□□□ 0.28
PRDM16-210ENST00000607632 PPP4R2Q9NY27 417 aa16.79■□□□□ 0.28
PRDM16-210ENST00000607632 DDX20Q9UHI6 824 aaKnown RBP16.79■□□□□ 0.28
PRDM16-210ENST00000607632 PNMA2Q9UL42 364 aa16.79■□□□□ 0.28
PRDM16-210ENST00000607632 ISY1Q9ULR0 285 aaKnown RBP16.79■□□□□ 0.28
PRDM16-210ENST00000607632 ALPK3Q96L96 1907 aa16.78■□□□□ 0.28
PRDM16-210ENST00000607632 SLC27A2O14975 620 aa16.78■□□□□ 0.28
PRDM16-210ENST00000607632 IFIT1BQ5T764 474 aaKnown RBP16.78■□□□□ 0.28
PRDM16-210ENST00000607632 PRPF38BQ5VTL8 546 aaKnown RBP16.78■□□□□ 0.28
PRDM16-210ENST00000607632 RALYLQ86SE5 291 aaKnown RBP16.78■□□□□ 0.28
PRDM16-210ENST00000607632 FAM133AQ8N9E0 248 aa16.78■□□□□ 0.28
PRDM16-210ENST00000607632 DDX11Q96FC9 970 aa16.78■□□□□ 0.28
PRDM16-210ENST00000607632 TRERF1Q96PN7 1200 aa16.78■□□□□ 0.28
PRDM16-210ENST00000607632 A1CFQ9NQ94 594 aaKnown RBP16.78■□□□□ 0.28
PRDM16-210ENST00000607632 LRRC37A2A6NM11 1700 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 SEPT4O43236 478 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 COL6A1P12109 1028 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 SNAP25P60880 206 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 MUM1L1Q5H9M0 696 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 CREB3L3Q68CJ9 461 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 CCDC174Q6PII3 467 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 ANKRD35Q8N283 1001 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 ANO2Q9NQ90 1003 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 CCPG1Q9ULG6 757 aa16.77■□□□□ 0.28
PRDM16-210ENST00000607632 PFASO15067 1338 aa16.76■□□□□ 0.27
PRDM16-210ENST00000607632 ZNF865P0CJ78 1059 aaPredicted RBP16.76■□□□□ 0.27
PRDM16-210ENST00000607632 GOLGA8HP0CJ92 632 aa16.76■□□□□ 0.27
PRDM16-210ENST00000607632 ALAS1P13196 640 aa16.76■□□□□ 0.27
PRDM16-210ENST00000607632 TROAPQ12815 778 aa16.76■□□□□ 0.27
PRDM16-210ENST00000607632 TSGA10IPQ3SY00 556 aa16.76■□□□□ 0.27
PRDM16-210ENST00000607632 DIS3LQ8TF46 1054 aaKnown RBP16.76■□□□□ 0.27
PRDM16-210ENST00000607632 PAWRQ96IZ0 340 aaKnown RBP16.76■□□□□ 0.27
PRDM16-210ENST00000607632 MAF1Q9H063 256 aa16.76■□□□□ 0.27
PRDM16-210ENST00000607632 CYP39A1Q9NYL5 469 aa16.76■□□□□ 0.27
PRDM16-210ENST00000607632 MCM3APO60318 1980 aa16.76■□□□□ 0.27
PRDM16-210ENST00000607632 PALM3A6NDB9 673 aaPredicted RBP16.75■□□□□ 0.27
PRDM16-210ENST00000607632 IFIT3O14879 490 aaKnown RBP16.75■□□□□ 0.27
PRDM16-210ENST00000607632 SNAI1O95863 264 aaPredicted RBP16.75■□□□□ 0.27
PRDM16-210ENST00000607632 PARP1P09874 1014 aaKnown RBP16.75■□□□□ 0.27
PRDM16-210ENST00000607632 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
PRDM16-210ENST00000607632 NECAB2Q7Z6G3 386 aa16.75■□□□□ 0.27
PRDM16-210ENST00000607632 CLEC4DQ8WXI8 215 aa16.75■□□□□ 0.27
PRDM16-210ENST00000607632 MTMR8Q96EF0 704 aa16.75■□□□□ 0.27
PRDM16-210ENST00000607632 HTATIP2Q9BUP3 242 aa16.75■□□□□ 0.27
PRDM16-210ENST00000607632 UBA5Q9GZZ9 404 aa16.75■□□□□ 0.27
PRDM16-210ENST00000607632 SENP2Q9HC62 589 aa16.75■□□□□ 0.27
PRDM16-210ENST00000607632 HOMER2Q9NSB8 354 aa16.75■□□□□ 0.27
PRDM16-210ENST00000607632 MAD2L2Q9UI95 211 aa16.75■□□□□ 0.27
PRDM16-210ENST00000607632 ASTN1O14525 1302 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 SOWAHBA6NEL2 793 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 SLC4A3P48751 1232 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 CNTN2Q02246 1040 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 COL9A3Q14050 684 aaPredicted RBP16.74■□□□□ 0.27
PRDM16-210ENST00000607632 GRM4Q14833 912 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 WTAPQ15007 396 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 SART3Q15020 963 aaKnown RBP16.74■□□□□ 0.27
PRDM16-210ENST00000607632 PRAMEF19Q5SWL8 479 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 ADGRF4Q8IZF3 695 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 STAG2Q8N3U4 1231 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 MORC4Q8TE76 937 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 KCNB2Q92953 911 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 MAP3K14Q99558 947 aa16.74■□□□□ 0.27
PRDM16-210ENST00000607632 KATNBL1Q9H079 304 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms