RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 SMARCC1Q92922 1105 aaPredicted RBP6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 MPP4Q96JB8 637 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 CEP89Q96ST8 783 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 BCO2Q9BYV7 579 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 CPSF2Q9P2I0 782 aaKnown RBP6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 RABL2BQ9UNT1 228 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 JRKLQ9Y4A0 524 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 SNX11Q9Y5W9 270 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 DHX29Q7Z478 1369 aaKnown RBP6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 DBX1A6NMT0 343 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 MTA2O94776 668 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 FARP2O94887 1054 aaPredicted RBP6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 NAT2P11245 290 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 XBP1P17861 261 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 NME2P22392 152 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 MSNP26038 577 aaKnown RBP6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 GTF2F1P35269 517 aaKnown RBP eCLIP6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 MAP2K2P36507 400 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 ZC3H6P61129 1189 aaKnown RBP6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 CBX1P83916 185 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 ICA1Q05084 483 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 PTPROQ16827 1216 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 SLC23A3Q6PIS1 610 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 KRT77Q7Z794 578 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 NOP9Q86U38 636 aaKnown RBP6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 FLAD1Q8NFF5 587 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 GPBAR1Q8TDU6 330 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 GIMAP1Q8WWP7 306 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 GOLGA1Q92805 767 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 IWS1Q96ST2 819 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 TRIM7Q9C029 511 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 UNC45AQ9H3U1 944 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 NLRP2Q9NX02 1062 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 HOXC10Q9NYD6 342 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 ZNF652Q9Y2D9 606 aa6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 TMA7Q9Y2S6 64 aaKnown RBP6.79□□□□□ -1.32
LSM1P2-201ENST00000604911 TMEM110-MUSTN1A8MSY1 372 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 IGF2BP3O00425 579 aaKnown RBP eCLIP6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 HIP1RO75146 1068 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 VAMP4O75379 141 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 TGFB3P10600 412 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 CD53P19397 219 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 CLK1P49759 484 aaKnown RBP6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 RING1Q06587 406 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 EIF2B5Q13144 721 aaKnown RBP6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 PDIA5Q14554 519 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 KRT72Q14CN4 511 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 RABEP1Q15276 862 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 CCDC178Q5BJE1 867 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 ANGEL2Q5VTE6 544 aaKnown RBP6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 MAP1SQ66K74 1059 aaPredicted RBP6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 CC2D1AQ6P1N0 951 aaPredicted RBP6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 TMC7Q7Z402 723 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 TTC30AQ86WT1 665 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 DRAXINQ8NBI3 349 aaPredicted RBP6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 C3orf58Q8NDZ4 430 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 ANKRD20A12PQ8NF67 263 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 RPS6KC1Q96S38 1066 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 LRRC27Q9C0I9 530 aa6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 MORC2Q9Y6X9 1032 aaPredicted RBP6.78□□□□□ -1.32
LSM1P2-201ENST00000604911 PRDM2Q13029 1718 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 A0A1B0GUL7 405 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 E2F6O75461 281 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 HARSP12081 509 aaKnown RBP6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 IBSPP21815 317 aaPredicted RBP6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 RDXP35241 583 aaKnown RBP6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 INHBEP58166 350 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 NUCB2P80303 420 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 MESP2Q0VG99 397 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 WASHC5Q12768 1159 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 PRPF4BQ13523 1007 aaKnown RBP6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 BECN1Q14457 450 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 DSC3Q14574 896 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 RBBP5Q15291 538 aaKnown RBP6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 SLC5A9Q2M3M2 681 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 MUM1L1Q5H9M0 696 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 MPRIPQ6WCQ1 1025 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 SPOCD1Q6ZMY3 1216 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 DPH6Q7L8W6 267 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 SPACA3Q8IXA5 215 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 CCDC26Q8TAB7 109 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 EMILIN2Q9BXX0 1053 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 MAK16Q9BXY0 300 aaKnown RBP6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 NCAPD3P42695 1498 aa6.77□□□□□ -1.33
LSM1P2-201ENST00000604911 F8VZ95 297 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 KRT38O76015 456 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 MYBL2P10244 700 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 TNNT1P13805 278 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 ITIH2P19823 946 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 BMP6P22004 513 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 HOXD10P28358 340 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 SH3BGRP55822 239 aaPredicted RBP6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 EVA1CP58658 441 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 CCDC173Q0VFZ6 552 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 TRIM29Q14134 588 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 KCTD2Q14681 263 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 PARP10Q53GL7 1025 aa6.76□□□□□ -1.33
LSM1P2-201ENST00000604911 ACBD5Q5T8D3 534 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms