RNA–Protein interactions for RNA: ENST00000601071.1

BRD4-209, Transcript of bromodomain containing 4, humanhuman

TSL 5

Gene BRD4, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-209ENST00000601071 VSTM4Q8IW00 320 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 DIS3L2Q8IYB7 885 aaKnown RBP6.34□□□□□ -1.39
BRD4-209ENST00000601071 SYNE4Q8N205 404 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 ZNF397Q8NF99 534 aaPredicted RBP6.34□□□□□ -1.39
BRD4-209ENST00000601071 WHAMMQ8TF30 809 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 ZNF592Q92610 1267 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 PHKBQ93100 1093 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 HLA-CQ95604 372 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 CTAGE1Q96RT6 745 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 BRIP1Q9BX63 1249 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 TMX1Q9H3N1 280 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 ARMT1Q9H993 441 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 L2HGDHQ9H9P8 463 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 DNMT3LQ9UJW3 386 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 PCDHA5Q9Y5H7 936 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 PAPPAQ13219 1627 aa6.34□□□□□ -1.39
BRD4-209ENST00000601071 LAMB4A4D0S4 1761 aa6.34□□□□□ -1.4
BRD4-209ENST00000601071 ARFGEF2Q9Y6D5 1785 aa6.34□□□□□ -1.4
BRD4-209ENST00000601071 PDS5AQ29RF7 1337 aaKnown RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 PHLPP2Q6ZVD8 1323 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 BTBD18B2RXH4 712 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 BIN1O00499 593 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 ATP8B1O43520 1251 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 STX10O60499 249 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 RANBP6O60518 1105 aaKnown RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 DDAH1O94760 285 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 CAMTA2O94983 1202 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 ZIC2O95409 532 aaPredicted RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 SLFN14P0C7P3 912 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 BMP2P12643 396 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 YBX3P16989 372 aaKnown RBP eCLIP6.33□□□□□ -1.44e-7■■□□□ 12.6
BRD4-209ENST00000601071 LMOD1P29536 600 aaPredicted RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 KRT2P35908 639 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 GNAQP50148 359 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 CTDSPL2Q05D32 466 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 GABPB1Q06547 395 aaPredicted RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 MORC3Q14149 939 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 POSTNQ15063 836 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 ZNF827Q17R98 1081 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 CFAP100Q494V2 611 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 FILIP1LQ4L180 1135 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 E4F1Q66K89 784 aaPredicted RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 SPTY2D1Q68D10 685 aaPredicted RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 ARMCX5Q6P1M9 558 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 INTS5Q6P9B9 1019 aaKnown RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 HOMER1Q86YM7 354 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 KRTAP1-3Q8IUG1 177 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 ANKRD18AQ8IVF6 992 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 ZNF654Q8IZM8 581 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 ZNF511Q8NB15 262 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 PPP1R13BQ96KQ4 1090 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 CDK15Q96Q40 435 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 SLC4A9Q96Q91 983 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 GSDMAQ96QA5 445 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 NAA15Q9BXJ9 866 aaKnown RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 ANKRD2Q9GZV1 360 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 UNC93B1Q9H1C4 597 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 TOMM22Q9NS69 142 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 BSDC1Q9NW68 430 aaPredicted RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 ARGLU1Q9NWB6 273 aaPredicted RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 TRMT1Q9NXH9 659 aaKnown RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 AATFQ9NY61 560 aaKnown RBP eCLIP6.33□□□□□ -1.4
BRD4-209ENST00000601071 TFCP2L1Q9NZI6 479 aa6.33□□□□□ -1.4
BRD4-209ENST00000601071 DDX41Q9UJV9 622 aaKnown RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 FBXO2Q9UK22 296 aaPredicted RBP6.33□□□□□ -1.4
BRD4-209ENST00000601071 NEDD4P46934 1319 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 LOC102724428A0A0B4J2F2 783 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 POLR2DO15514 142 aaKnown RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 ORC4O43929 436 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 ZNF18P17022 549 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 CALML3P27482 149 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 KIF5BP33176 963 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 CRKLP46109 303 aaKnown RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 TOB1P50616 345 aaPredicted RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 PLCD1P51178 756 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 SIK1P57059 783 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 CHRNDQ07001 517 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 TBX2Q13207 712 aaPredicted RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 PNOCQ13519 176 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 TTLL12Q14166 644 aaPredicted RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 BMS1Q14692 1282 aaKnown RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 ARID5BQ14865 1188 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 SEC23AQ15436 765 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.32□□□□□ -1.45e-9■□□□□ 11
BRD4-209ENST00000601071 CCDC93Q567U6 631 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 RRP12Q5JTH9 1297 aaKnown RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 SPATA1Q5VX52 437 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 SPECC1LQ69YQ0 1117 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 GALNT17Q6IS24 598 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 METTL16Q86W50 562 aaKnown RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 PPFIBP1Q86W92 1011 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 RAB11FIP4Q86YS3 637 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 FOXP4Q8IVH2 680 aaPredicted RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 STK11IPQ8N1F8 1099 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 Q8N3U1 123 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 ANKRD20A12PQ8NF67 263 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 HELBQ8NG08 1087 aaPredicted RBP6.32□□□□□ -1.4
BRD4-209ENST00000601071 SPATA20Q8TB22 786 aa6.32□□□□□ -1.4
BRD4-209ENST00000601071 NUP133Q8WUM0 1156 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms