RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 GBP3Q9H0R5 595 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 ADAMTS10Q9H324 1103 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 SLAMF8Q9P0V8 285 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 WHRNQ9P202 907 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 SUSD2Q9UGT4 822 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 TCFL5Q9UL49 500 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 DIS3Q9Y2L1 958 aaKnown RBP5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 ZNF281Q9Y2X9 895 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 FHOD1Q9Y613 1164 aa5.59□□□□□ -1.51
CKS1BP3-201ENST00000600888 KDM5BQ9UGL1 1544 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 UACAQ9BZF9 1416 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 ANKRD34BA5PLL1 514 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 DDAH1O94760 285 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 GSNP06396 782 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 SYPP08247 313 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 VAV1P15498 845 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 BMP8BP34820 402 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 GTF2F1P35269 517 aaKnown RBP eCLIP5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 FIBCD1Q8N539 461 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 CELF2-AS1Q8N7Q2 184 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 SYTL4Q96C24 671 aaPredicted RBP5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 CCDC120Q96HB5 630 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 APBA2Q99767 749 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 NOL6Q9H6R4 1146 aaKnown RBP5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 ST7Q9NRC1 585 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 C19orf73Q9NVV2 129 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 TMEM59LQ9UK28 342 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 CTNND2Q9UQB3 1225 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 KIF21BO75037 1637 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 ZCCHC11Q5TAX3 1644 aaKnown RBP5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 GLI2P10070 1586 aa5.58□□□□□ -1.52
CKS1BP3-201ENST00000600888 B2RBV5 119 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 PPM1BO75688 479 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 RPL10P27635 214 aaKnown RBP5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 GDNFP39905 211 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 ZNF143P52747 638 aaPredicted RBP5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 RBL2Q08999 1139 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 RAB33AQ14088 237 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 SF3A1Q15459 793 aaKnown RBP5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 CWF19L1Q69YN2 538 aaKnown RBP5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 CRTC3Q6UUV7 619 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 ATG4DQ86TL0 474 aaPredicted RBP5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 CKAP2LQ8IYA6 745 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 ZNF513Q8N8E2 541 aaPredicted RBP5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 DHX38Q92620 1227 aaKnown RBP5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 ARMC5Q96C12 935 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 PPP1R1BQ9UD71 204 aaPredicted RBP5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 SF3B6Q9Y3B4 125 aaKnown RBP5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 ABCA8O94911 1581 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 SAMD9Q5K651 1589 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 TSPOAP1O95153 1857 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 PLB1Q6P1J6 1458 aa5.57□□□□□ -1.52
CKS1BP3-201ENST00000600888 TMEM82A0PJX8 343 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 H0Y8X5 98 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 FKTNO75072 461 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 ZNF205O95201 554 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 GJB6O95452 261 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 ZGLP1P0C6A0 271 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 TAL1P17542 331 aaPredicted RBP5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 HK2P52789 917 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 PPP2R5DQ14738 602 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 ZPBP2Q6X784 338 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 WAPLQ7Z5K2 1190 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 ARHGEF39Q8N4T4 335 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 FLAD1Q8NFF5 587 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 ADCY4Q8NFM4 1077 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 SREK1Q8WXA9 508 aaKnown RBP5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 RCC1LQ96I51 464 aaKnown RBP5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 HIRIP3Q9BW71 556 aaPredicted RBP5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 EBF1Q9UH73 591 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 SUGT1Q9Y2Z0 365 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 PPRC1Q5VV67 1664 aaKnown RBP5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 MAP3K4Q9Y6R4 1608 aa5.56□□□□□ -1.52
CKS1BP3-201ENST00000600888 BIN1O00499 593 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 NAT2P11245 290 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 NOP2P46087 812 aaKnown RBP5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 POU4F1Q01851 419 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 DUSP4Q13115 394 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 DDR2Q16832 855 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 MRM1Q6IN84 353 aaKnown RBP5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 LINC01599Q8WXQ3 324 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 ZDHHC15Q96MV8 337 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 G6PC3Q9BUM1 346 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 SLC12A9Q9BXP2 914 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 TRIM55Q9BYV6 548 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 APEX2Q9UBZ4 518 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 ZMYM5Q9UJ78 669 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 AKT3Q9Y243 479 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 ASXL2Q76L83 1435 aa5.55□□□□□ -1.52
CKS1BP3-201ENST00000600888 CFAP43Q8NDM7 1665 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 SUSD5O60279 629 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 VAMP4O75379 141 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 ITGB5P18084 799 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 ENDOUP21128 410 aaKnown RBP5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 AFMP43652 599 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 RTP2Q5QGT7 225 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 NBPF6Q5VWK0 638 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 OXR1Q8N573 874 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 BVESQ8NE79 360 aa5.54□□□□□ -1.52
CKS1BP3-201ENST00000600888 PDZD8Q8NEN9 1154 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms