RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 M0R2N6 131 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 ADAMTS4O75173 837 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 WDHD1O75717 1129 aaPredicted RBP7.06□□□□□ -1.28
DNMT1-220ENST00000589351 ZBTB48P10074 688 aaPredicted RBP7.06□□□□□ -1.28
DNMT1-220ENST00000589351 PTPN12Q05209 780 aaKnown RBP7.06□□□□□ -1.28
DNMT1-220ENST00000589351 PRKG1Q13976 671 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 DHX32Q7L7V1 743 aaKnown RBP7.06□□□□□ -1.28
DNMT1-220ENST00000589351 KRT25Q7Z3Z0 450 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 KIAA0825Q8IV33 1275 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 C8orf58Q8NAV2 365 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 ERO1AQ96HE7 468 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 MYH16Q9H6N6 1097 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 GREM2Q9H772 168 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 PPP2R3BQ9Y5P8 575 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 SCN9AQ15858 1988 aa7.06□□□□□ -1.28
DNMT1-220ENST00000589351 ANKRD18BA2A2Z9 1011 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 TARSP26639 723 aaKnown RBP7.05□□□□□ -1.28
DNMT1-220ENST00000589351 ATP1A2P50993 1020 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 LDLRAD1Q5T700 205 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 UBE3BQ7Z3V4 1068 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 ZNF804AQ7Z570 1209 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 STAG2Q8N3U4 1231 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 MRPL18Q9H0U6 180 aaKnown RBP7.05□□□□□ -1.28
DNMT1-220ENST00000589351 SMG9Q9H0W8 520 aaKnown RBP7.05□□□□□ -1.28
DNMT1-220ENST00000589351 DEFB129Q9H1M3 183 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 SCAF8Q9UPN6 1271 aaKnown RBP7.05□□□□□ -1.28
DNMT1-220ENST00000589351 RAXQ9Y2V3 346 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 TRIM17Q9Y577 477 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 PSME4Q14997 1843 aa7.05□□□□□ -1.28
DNMT1-220ENST00000589351 TGFBR3LH3BV60 316 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 SASH1O94885 1247 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 IGLV1-40P01703 118 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 IGKV5-2P06315 115 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 RBM5P52756 815 aaKnown RBP eCLIP7.04□□□□□ -1.28
DNMT1-220ENST00000589351 GPLD1P80108 840 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 TNFAIP1Q13829 316 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 MAP3K11Q16584 847 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 CWF19L2Q2TBE0 894 aaKnown RBP7.04□□□□□ -1.28
DNMT1-220ENST00000589351 HFE2Q6ZVN8 426 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 IFT43Q96FT9 208 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 MXD3Q9BW11 206 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 PLA2G12BQ9BX93 195 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 CD209Q9NNX6 404 aa7.04□□□□□ -1.28
DNMT1-220ENST00000589351 COL1A1P02452 1464 aaPredicted RBP7.04□□□□□ -1.28
DNMT1-220ENST00000589351 TNRC18O15417 2968 aaPredicted RBP7.03□□□□□ -1.28
DNMT1-220ENST00000589351 CSF1RP07333 972 aa7.03□□□□□ -1.28
DNMT1-220ENST00000589351 BRD2P25440 801 aaKnown RBP7.03□□□□□ -1.28
DNMT1-220ENST00000589351 FKBP1AP62942 108 aaKnown RBP7.03□□□□□ -1.28
DNMT1-220ENST00000589351 CHRNDQ07001 517 aa7.03□□□□□ -1.28
DNMT1-220ENST00000589351 IFIT5Q13325 482 aaKnown RBP7.03□□□□□ -1.28
DNMT1-220ENST00000589351 FKBP5Q13451 457 aaPredicted RBP7.03□□□□□ -1.28
DNMT1-220ENST00000589351 GCKRQ14397 625 aa7.03□□□□□ -1.28
DNMT1-220ENST00000589351 TWISTNBQ3B726 338 aaPredicted RBP7.03□□□□□ -1.28
DNMT1-220ENST00000589351 TAF7LQ5H9L4 462 aa7.03□□□□□ -1.28
DNMT1-220ENST00000589351 Q6ZS46 218 aa7.03□□□□□ -1.28
DNMT1-220ENST00000589351 ANKRD13AQ8IZ07 590 aa7.03□□□□□ -1.28
DNMT1-220ENST00000589351 AGGF1Q8N302 714 aaeCLIP7.03□□□□□ -1.28
DNMT1-220ENST00000589351 SCG3Q8WXD2 468 aaKnown RBP7.03□□□□□ -1.28
DNMT1-220ENST00000589351 PRKRIP1Q9H875 184 aaPredicted RBP7.03□□□□□ -1.28
DNMT1-220ENST00000589351 VEZTQ9HBM0 779 aa7.03□□□□□ -1.28
DNMT1-220ENST00000589351 PDE4DIPQ5VU43 2346 aa7.02□□□□□ -1.28
DNMT1-220ENST00000589351 MYH3P11055 1940 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 WTIPA6NIX2 430 aaPredicted RBP7.02□□□□□ -1.29
DNMT1-220ENST00000589351 GSC2O15499 205 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 DKK1O94907 266 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 INPP5BP32019 993 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 TNNI2P48788 182 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 SP3Q02447 781 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 KIF22Q14807 665 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 RTN1Q16799 776 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 CCDC57Q2TAC2 916 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 CFAP100Q494V2 611 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 USP17L2Q6R6M4 530 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 C15orf52Q6ZUT6 534 aaKnown RBP7.02□□□□□ -1.29
DNMT1-220ENST00000589351 OTOP1Q7RTM1 612 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 PLEKHM2Q8IWE5 1019 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 LINS1Q8NG48 757 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 DNAAF4Q8WXU2 420 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 ZBED3Q96IU2 234 aaPredicted RBP7.02□□□□□ -1.29
DNMT1-220ENST00000589351 WNK4Q96J92 1243 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 SERPINA10Q9UK55 444 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 PTPN22Q9Y2R2 807 aa7.02□□□□□ -1.29
DNMT1-220ENST00000589351 COL4A1P02462 1669 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 PALM3A6NDB9 673 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-220ENST00000589351 F8W031 263 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-220ENST00000589351 PLIN1O60240 522 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 TAF5LO75529 589 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 USP2O75604 605 aaPredicted RBP7.01□□□□□ -1.29
DNMT1-220ENST00000589351 SASH3O75995 380 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 RARAP10276 462 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 IL1R1P14778 569 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 GLB1P16278 677 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 EPB42P16452 691 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 IDH3AP50213 366 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 RASA3Q14644 834 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 CCDC27Q2M243 656 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 LDHAL6AQ6ZMR3 332 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 ZDHHC13Q8IUH4 622 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 TSPYL6Q8N831 410 aa7.01□□□□□ -1.29
DNMT1-220ENST00000589351 HOOK2Q96ED9 719 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms