RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 CATSPERGQ6ZRH7 1159 aa14.91□□□□□ -0.02
SPG7-209ENST00000564047 RASAL3Q86YV0 1011 aa14.91□□□□□ -0.02
SPG7-209ENST00000564047 PRPF38AQ8NAV1 312 aaKnown RBP14.91□□□□□ -0.02
SPG7-209ENST00000564047 PIGSQ96S52 555 aa14.91□□□□□ -0.02
SPG7-209ENST00000564047 SLF1Q9BQI6 1058 aa14.91□□□□□ -0.02
SPG7-209ENST00000564047 TANGO6Q9C0B7 1094 aa14.91□□□□□ -0.02
SPG7-209ENST00000564047 SEC63Q9UGP8 760 aaKnown RBP14.91□□□□□ -0.02
SPG7-209ENST00000564047 BRCA2P51587 3418 aa14.91□□□□□ -0.02
SPG7-209ENST00000564047 HTTP42858 3142 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 hCG_1642624A0A1W2PR95 340 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 hCG_1984214I3L0E3 225 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 ZBTB5O15062 677 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 FLOT1O75955 427 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 FDX1P10109 184 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 CETPP11597 493 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 XBP1P17861 261 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 SYT1P21579 422 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 HOXA7P31268 230 aaPredicted RBP14.9□□□□□ -0.02
SPG7-209ENST00000564047 CDC37Q16543 378 aaPredicted RBP14.9□□□□□ -0.02
SPG7-209ENST00000564047 HOMER1Q86YM7 354 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 FAM177A1Q8N128 213 aaPredicted RBP14.9□□□□□ -0.02
SPG7-209ENST00000564047 ZNF713Q8N859 430 aaPredicted RBP14.9□□□□□ -0.02
SPG7-209ENST00000564047 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 KIFC2Q96AC6 838 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 MS4A4AQ96JQ5 239 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 C8orf76Q96K31 380 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 RANBP17Q9H2T7 1088 aaKnown RBP14.9□□□□□ -0.02
SPG7-209ENST00000564047 FBXO28Q9NVF7 368 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 PPP1R9AQ9ULJ8 1098 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 AGTPBP1Q9UPW5 1226 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 MYPNQ86TC9 1320 aa14.9□□□□□ -0.02
SPG7-209ENST00000564047 DSG3P32926 999 aa14.89□□□□□ -0.03
SPG7-209ENST00000564047 NUCB2P80303 420 aa14.89□□□□□ -0.03
SPG7-209ENST00000564047 PABPC4Q13310 644 aaKnown RBP eCLIP14.89□□□□□ -0.03
SPG7-209ENST00000564047 COG2Q14746 738 aa14.89□□□□□ -0.03
SPG7-209ENST00000564047 TREML2Q5T2D2 321 aa14.89□□□□□ -0.03
SPG7-209ENST00000564047 GPAT2Q6NUI2 795 aa14.89□□□□□ -0.03
SPG7-209ENST00000564047 ZNF296Q8WUU4 475 aaPredicted RBP14.89□□□□□ -0.03
SPG7-209ENST00000564047 AIFM3Q96NN9 605 aa14.89□□□□□ -0.03
SPG7-209ENST00000564047 SH3GLB2Q9NR46 395 aa14.89□□□□□ -0.03
SPG7-209ENST00000564047 HOXC10Q9NYD6 342 aa14.89□□□□□ -0.03
SPG7-209ENST00000564047 CHMP5Q9NZZ3 219 aa14.89□□□□□ -0.03
SPG7-209ENST00000564047 CCL15-CCL14A0A0B4J2E2 113 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 TESPA1A2RU30 521 aaPredicted RBP14.88□□□□□ -0.03
SPG7-209ENST00000564047 STX6O43752 255 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 TRAF1Q13077 416 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 TRIM29Q14134 588 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 CCL15Q16663 113 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 QRICH1Q2TAL8 776 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 FBXO46Q6PJ61 603 aaPredicted RBP14.88□□□□□ -0.03
SPG7-209ENST00000564047 FBXO18Q8NFZ0 1043 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 BARHL2Q9NY43 387 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 ADAMTS5Q9UNA0 930 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 SLC45A1Q9Y2W3 748 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 LOC285556D6RIA3 1793 aa14.88□□□□□ -0.03
SPG7-209ENST00000564047 MANSC4A6NHS7 340 aaPredicted RBP14.87□□□□□ -0.03
SPG7-209ENST00000564047 H3BQV1 296 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 ZBED4O75132 1171 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 OSBPP22059 807 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 MKRN3Q13064 507 aaKnown RBP14.87□□□□□ -0.03
SPG7-209ENST00000564047 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 HEATR3Q7Z4Q2 680 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 ANKRD23Q86SG2 305 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 CCDC12Q8WUD4 166 aaPredicted RBP14.87□□□□□ -0.03
SPG7-209ENST00000564047 BRI3BPQ8WY22 251 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 AMNQ9BXJ7 453 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 SLC38A10Q9HBR0 1119 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 VPS54Q9P1Q0 977 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 PNMA2Q9UL42 364 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 MTMR6Q9Y217 621 aa14.87□□□□□ -0.03
SPG7-209ENST00000564047 SZT2Q5T011 3432 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 STXBP3O00186 592 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 VWA5AO00534 786 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 PPP1R11O60927 126 aaPredicted RBP14.86□□□□□ -0.03
SPG7-209ENST00000564047 BRD1O95696 1058 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 TBC1D8O95759 1140 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 DEKP35659 375 aaKnown RBP14.86□□□□□ -0.03
SPG7-209ENST00000564047 SNAP25P60880 206 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 IRX3P78415 501 aaPredicted RBP14.86□□□□□ -0.03
SPG7-209ENST00000564047 KRT40Q6A162 431 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 PPP1R18Q6NYC8 613 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 LBX2Q6XYB7 198 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 FBXO11Q86XK2 927 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 CCDC148Q8NFR7 591 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 GPKOWQ92917 476 aaPredicted RBP eCLIP14.86□□□□□ -0.03
SPG7-209ENST00000564047 ATG4CQ96DT6 458 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 ASCC2Q9H1I8 757 aaPredicted RBP14.86□□□□□ -0.03
SPG7-209ENST00000564047 GJB4Q9NTQ9 266 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 PNMA3Q9UL41 463 aa14.86□□□□□ -0.03
SPG7-209ENST00000564047 KIAA0100Q14667 2235 aaKnown RBP14.85□□□□□ -0.03
SPG7-209ENST00000564047 ESYT2A0FGR8 921 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 VPS37CA5D8V6 355 aaPredicted RBP14.85□□□□□ -0.03
SPG7-209ENST00000564047 SPDYE16A6NNV3 312 aaPredicted RBP14.85□□□□□ -0.03
SPG7-209ENST00000564047 BTBD19C9JJ37 291 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 ICAM1P05362 532 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 ZSCAN22P10073 491 aaPredicted RBP14.85□□□□□ -0.03
SPG7-209ENST00000564047 FOSBP53539 338 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 OAZ1P54368 228 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 NAPAP54920 295 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 INHBEP58166 350 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms