RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 RIOX1Q9H6W3 641 aa17.74■□□□□ 0.43
EDC3-206ENST00000563009 TRIM17Q9Y577 477 aa17.74■□□□□ 0.43
EDC3-206ENST00000563009 NID2Q14112 1375 aa17.74■□□□□ 0.43
EDC3-206ENST00000563009 PLXNB2O15031 1838 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 DOCK3Q8IZD9 2030 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 CYTH3O43739 400 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 ECM2O94769 699 aaPredicted RBP17.73■□□□□ 0.43
EDC3-206ENST00000563009 HOXD10P28358 340 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 GNAQP50148 359 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 PRMT2P55345 433 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 PKN2Q16513 984 aaKnown RBP17.73■□□□□ 0.43
EDC3-206ENST00000563009 PLEKHH3Q7Z736 793 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 NBPF11Q86T75 865 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 RAB11FIP4Q86YS3 637 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 CCAR1Q8IX12 1150 aaKnown RBP17.73■□□□□ 0.43
EDC3-206ENST00000563009 COA7Q96BR5 231 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 TBC1D32Q96NH3 1257 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 SPZ1Q9BXG8 430 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 JMJD4Q9H9V9 463 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 SRRDQ9UH36 339 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 GJD2Q9UKL4 321 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 HPS5Q9UPZ3 1129 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 RIPK3Q9Y572 518 aa17.73■□□□□ 0.43
EDC3-206ENST00000563009 ZNF236Q9UL36 1845 aa17.72■□□□□ 0.43
EDC3-206ENST00000563009 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
EDC3-206ENST00000563009 PPP2R5BQ15173 497 aa17.72■□□□□ 0.43
EDC3-206ENST00000563009 CDC37Q16543 378 aaPredicted RBP17.72■□□□□ 0.43
EDC3-206ENST00000563009 CCDC174Q6PII3 467 aa17.72■□□□□ 0.43
EDC3-206ENST00000563009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
EDC3-206ENST00000563009 NCAPG2Q86XI2 1143 aa17.72■□□□□ 0.43
EDC3-206ENST00000563009 CCDC144CPQ8IYA2 1237 aa17.72■□□□□ 0.43
EDC3-206ENST00000563009 AGBL1Q96MI9 1066 aa17.72■□□□□ 0.43
EDC3-206ENST00000563009 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
EDC3-206ENST00000563009 RBM28Q9NW13 759 aaKnown RBP17.72■□□□□ 0.43
EDC3-206ENST00000563009 STRNO43815 780 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 PLEKHA8P1O95397 391 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 PTPREP23469 700 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 PDIA3P30101 505 aaKnown RBP17.71■□□□□ 0.43
EDC3-206ENST00000563009 NEK4P51957 841 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 PRKCZQ05513 592 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 GRB14Q14449 540 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 ANKRD1Q15327 319 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 RTN1Q16799 776 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 TKFCQ3LXA3 575 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 MORN1Q5T089 497 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 TMTC3Q6ZXV5 915 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 ABRAQ8N0Z2 381 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 SRBD1Q8N5C6 995 aaKnown RBP17.71■□□□□ 0.43
EDC3-206ENST00000563009 CHST13Q8NET6 341 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 SOCS4Q8WXH5 440 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 USP6NLQ92738 828 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 ZNF274Q96GC6 653 aaPredicted RBP17.71■□□□□ 0.43
EDC3-206ENST00000563009 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 GABRQQ9UN88 632 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 PTPN22Q9Y2R2 807 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 HTTP42858 3142 aa17.71■□□□□ 0.43
EDC3-206ENST00000563009 SLC15A5A6NIM6 579 aa17.7■□□□□ 0.42
EDC3-206ENST00000563009 GOLGA8AA7E2F4 631 aa17.7■□□□□ 0.42
EDC3-206ENST00000563009 DHX16O60231 1041 aaKnown RBP17.7■□□□□ 0.42
EDC3-206ENST00000563009 METAP2P50579 478 aaKnown RBP eCLIP17.7■□□□□ 0.42
EDC3-206ENST00000563009 AK2P54819 239 aa17.7■□□□□ 0.42
EDC3-206ENST00000563009 IRF5Q13568 498 aa17.7■□□□□ 0.42
EDC3-206ENST00000563009 QRICH1Q2TAL8 776 aa17.7■□□□□ 0.42
EDC3-206ENST00000563009 COL13A1Q5TAT6 717 aaPredicted RBP17.7■□□□□ 0.42
EDC3-206ENST00000563009 WDR78Q5VTH9 848 aa17.7■□□□□ 0.42
EDC3-206ENST00000563009 VAT1LQ9HCJ6 419 aa17.7■□□□□ 0.42
EDC3-206ENST00000563009 IVNS1ABPQ9Y6Y0 642 aa17.7■□□□□ 0.42
EDC3-206ENST00000563009 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
EDC3-206ENST00000563009 MYH6P13533 1939 aa17.69■□□□□ 0.42
EDC3-206ENST00000563009 CCDC196A0A1B0GTZ2 297 aa17.69■□□□□ 0.42
EDC3-206ENST00000563009 ZBTB5O15062 677 aa17.69■□□□□ 0.42
EDC3-206ENST00000563009 CDC27P30260 824 aa17.69■□□□□ 0.42
EDC3-206ENST00000563009 FLT3LGP49771 235 aa17.69■□□□□ 0.42
EDC3-206ENST00000563009 FUT2Q10981 343 aa17.69■□□□□ 0.42
EDC3-206ENST00000563009 FBXO46Q6PJ61 603 aaPredicted RBP17.69■□□□□ 0.42
EDC3-206ENST00000563009 NUDT12Q9BQG2 462 aa17.69■□□□□ 0.42
EDC3-206ENST00000563009 CWC22Q9HCG8 908 aaKnown RBP17.69■□□□□ 0.42
EDC3-206ENST00000563009 FBXO40Q9UH90 709 aa17.69■□□□□ 0.42
EDC3-206ENST00000563009 NAP1L2Q9ULW6 460 aaPredicted RBP17.69■□□□□ 0.42
EDC3-206ENST00000563009 BAZ2BQ9UIF8 2168 aaKnown RBP17.69■□□□□ 0.42
EDC3-206ENST00000563009 PNMA6FA0A0J9YX94 578 aa17.68■□□□□ 0.42
EDC3-206ENST00000563009 FCER1AP12319 257 aa17.68■□□□□ 0.42
EDC3-206ENST00000563009 ALAS1P13196 640 aa17.68■□□□□ 0.42
EDC3-206ENST00000563009 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
EDC3-206ENST00000563009 IL27Q8NEV9 243 aa17.68■□□□□ 0.42
EDC3-206ENST00000563009 TRERF1Q96PN7 1200 aa17.68■□□□□ 0.42
EDC3-206ENST00000563009 PIGSQ96S52 555 aa17.68■□□□□ 0.42
EDC3-206ENST00000563009 LARP6Q9BRS8 491 aaKnown RBP17.68■□□□□ 0.42
EDC3-206ENST00000563009 ACAD9Q9H845 621 aa17.68■□□□□ 0.42
EDC3-206ENST00000563009 RNF146Q9NTX7 359 aa17.68■□□□□ 0.42
EDC3-206ENST00000563009 CNTNAP5Q8WYK1 1306 aa17.68■□□□□ 0.42
EDC3-206ENST00000563009 PPP1R11O60927 126 aaPredicted RBP17.67■□□□□ 0.42
EDC3-206ENST00000563009 HOXC6P09630 235 aa17.67■□□□□ 0.42
EDC3-206ENST00000563009 XRCC5P13010 732 aaKnown RBP17.67■□□□□ 0.42
EDC3-206ENST00000563009 TAL1P17542 331 aaPredicted RBP17.67■□□□□ 0.42
EDC3-206ENST00000563009 ADORA2AP29274 412 aa17.67■□□□□ 0.42
EDC3-206ENST00000563009 ADD1P35611 737 aaKnown RBP17.67■□□□□ 0.42
EDC3-206ENST00000563009 SLC4A3P48751 1232 aa17.67■□□□□ 0.42
EDC3-206ENST00000563009 MAP2K5Q13163 448 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms