RNA–Protein interactions for RNA: ENST00000557389.1

NFKBIA-209, Transcript of NFKB inhibitor alpha, human

TSL 2 BASIC

Gene NFKBIA, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKBIA-209	ENST00000557389	TYW1B	Q6NUM6	668 aa		32.41	■■■□□ 2.78
NFKBIA-209	ENST00000557389	ATG4C	Q96DT6	458 aa		32.41	■■■□□ 2.78
NFKBIA-209	ENST00000557389	MS4A4A	Q96JQ5	239 aa		32.41	■■■□□ 2.78
NFKBIA-209	ENST00000557389	BARHL2	Q9NY43	387 aa		32.41	■■■□□ 2.78
NFKBIA-209	ENST00000557389	ZSCAN22	P10073	491 aa	Predicted RBP	32.41	■■■□□ 2.78
NFKBIA-209	ENST00000557389	CETP	P11597	493 aa		32.41	■■■□□ 2.78
NFKBIA-209	ENST00000557389	NAPA	P54920	295 aa		32.41	■■■□□ 2.78
NFKBIA-209	ENST00000557389	USH1G	Q495M9	461 aa		32.41	■■■□□ 2.78
NFKBIA-209	ENST00000557389	FERMT3	Q86UX7	667 aa		32.41	■■■□□ 2.78
NFKBIA-209	ENST00000557389	COG2	Q14746	738 aa		32.4	■■■□□ 2.78
NFKBIA-209	ENST00000557389	GPAT2	Q6NUI2	795 aa		32.4	■■■□□ 2.78
NFKBIA-209	ENST00000557389	FBXO11	Q86XK2	927 aa		32.4	■■■□□ 2.78
NFKBIA-209	ENST00000557389	CTDP1	Q9Y5B0	961 aa	Predicted RBP	32.4	■■■□□ 2.78
NFKBIA-209	ENST00000557389	DSG3	P32926	999 aa		32.39	■■■□□ 2.78
NFKBIA-209	ENST00000557389	NLRP5	P59047	1200 aa		32.39	■■■□□ 2.78
NFKBIA-209	ENST00000557389	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.39	■■■□□ 2.78
NFKBIA-209	ENST00000557389	SMCHD1	A6NHR9	2005 aa		32.38	■■■□□ 2.77
NFKBIA-209	ENST00000557389	MMP1	P03956	469 aa		32.38	■■■□□ 2.77
NFKBIA-209	ENST00000557389	IRX3	P78415	501 aa	Predicted RBP	32.38	■■■□□ 2.77
NFKBIA-209	ENST00000557389	BRI3BP	Q8WY22	251 aa		32.38	■■■□□ 2.77
NFKBIA-209	ENST00000557389	PHF20	Q9BVI0	1012 aa		32.38	■■■□□ 2.77
NFKBIA-209	ENST00000557389	AMN	Q9BXJ7	453 aa		32.38	■■■□□ 2.77
NFKBIA-209	ENST00000557389	SH3GLB2	Q9NR46	395 aa		32.38	■■■□□ 2.77
NFKBIA-209	ENST00000557389	MYH15	Q9Y2K3	1946 aa		32.38	■■■□□ 2.77
NFKBIA-209	ENST00000557389		A0A0G2JMZ2	1700 aa		32.38	■■■□□ 2.77
NFKBIA-209	ENST00000557389	SLC10A3	P09131	477 aa		32.37	■■■□□ 2.77
NFKBIA-209	ENST00000557389	HOXA7	P31268	230 aa	Predicted RBP	32.37	■■■□□ 2.77
NFKBIA-209	ENST00000557389	CCDC148	Q8NFR7	591 aa		32.37	■■■□□ 2.77
NFKBIA-209	ENST00000557389	PCDHA1	Q9Y5I3	950 aa		32.37	■■■□□ 2.77
NFKBIA-209	ENST00000557389	SPDYE16	A6NNV3	312 aa	Predicted RBP	32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	hCG_1984214	I3L0E3	225 aa		32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	VWA5A	O00534	786 aa		32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	ZBED4	O75132	1171 aa		32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	F13A1	P00488	732 aa		32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	PDIA4	P13667	645 aa	Known RBP	32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	GRM1	Q13255	1194 aa		32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	CPXCR1	Q8N123	301 aa		32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	ZNF713	Q8N859	430 aa	Predicted RBP	32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	SLC38A10	Q9HBR0	1119 aa		32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	CEP350	Q5VT06	3117 aa		32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	PABPC4	Q13310	644 aa	Known RBP eCLIP	32.36	■■■□□ 2.77	4e-16	■■■■■ 41.2
NFKBIA-209	ENST00000557389	CCDC12	Q8WUD4	166 aa	Predicted RBP	32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	ASCC2	Q9H1I8	757 aa	Predicted RBP	32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	RAVER2	Q9HCJ3	691 aa	Known RBP	32.36	■■■□□ 2.77
NFKBIA-209	ENST00000557389	GNL2	Q13823	731 aa	Known RBP	32.35	■■■□□ 2.77
NFKBIA-209	ENST00000557389	SAFB	Q15424	915 aa	Known RBP eCLIP	32.35	■■■□□ 2.77
NFKBIA-209	ENST00000557389	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	32.35	■■■□□ 2.77
NFKBIA-209	ENST00000557389	FOXD4L3	Q6VB84	417 aa	Predicted RBP	32.35	■■■□□ 2.77
NFKBIA-209	ENST00000557389	DIS3L2	Q8IYB7	885 aa	Known RBP	32.35	■■■□□ 2.77
NFKBIA-209	ENST00000557389	HOXC10	Q9NYD6	342 aa		32.35	■■■□□ 2.77
NFKBIA-209	ENST00000557389	MYPN	Q86TC9	1320 aa		32.34	■■■□□ 2.77
NFKBIA-209	ENST00000557389	BTBD19	C9JJ37	291 aa		32.34	■■■□□ 2.77
NFKBIA-209	ENST00000557389	OSBP	P22059	807 aa		32.34	■■■□□ 2.77
NFKBIA-209	ENST00000557389	APLP1	P51693	650 aa		32.34	■■■□□ 2.77
NFKBIA-209	ENST00000557389	AGBL1	Q96MI9	1066 aa		32.34	■■■□□ 2.77
NFKBIA-209	ENST00000557389	P2RX7	Q99572	595 aa	Known RBP	32.34	■■■□□ 2.77
NFKBIA-209	ENST00000557389	CCPG1	Q9ULG6	757 aa		32.34	■■■□□ 2.77
NFKBIA-209	ENST00000557389	ZNF536	O15090	1300 aa		32.33	■■■□□ 2.77
NFKBIA-209	ENST00000557389	SMCO2	A6NFE2	343 aa		32.33	■■■□□ 2.77
NFKBIA-209	ENST00000557389	KIF28P	B7ZC32	967 aa		32.33	■■■□□ 2.77
NFKBIA-209	ENST00000557389	ADAMTS3	O15072	1205 aa		32.33	■■■□□ 2.77
NFKBIA-209	ENST00000557389	HSPA6	P17066	643 aa		32.33	■■■□□ 2.77
NFKBIA-209	ENST00000557389	KRT2	P35908	639 aa		32.33	■■■□□ 2.77
NFKBIA-209	ENST00000557389	KIF23	Q02241	960 aa	Predicted RBP	32.33	■■■□□ 2.77
NFKBIA-209	ENST00000557389	REST	Q13127	1097 aa		32.33	■■■□□ 2.77
NFKBIA-209	ENST00000557389	OXER1	Q8TDS5	423 aa		32.33	■■■□□ 2.77
NFKBIA-209	ENST00000557389	FAM155A	B1AL88	458 aa	Predicted RBP	32.32	■■■□□ 2.76
NFKBIA-209	ENST00000557389	CYP4F22	Q6NT55	531 aa		32.32	■■■□□ 2.76
NFKBIA-209	ENST00000557389	PPP1R18	Q6NYC8	613 aa		32.32	■■■□□ 2.76
NFKBIA-209	ENST00000557389	CCDC102A	Q96A19	550 aa		32.32	■■■□□ 2.76
NFKBIA-209	ENST00000557389	RBBP6	Q7Z6E9	1792 aa	Known RBP	32.32	■■■□□ 2.76
NFKBIA-209	ENST00000557389	BTBD18	B2RXH4	712 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	PDHX	O00330	501 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	ICAM1	P05362	532 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	FDX1	P10109	184 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	CALML3	P27482	149 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	NPY5R	Q15761	445 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	RGS22	Q8NE09	1264 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	TNPO1	Q92973	898 aa	Known RBP	32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	BRMS1	Q9HCU9	246 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	ADAMTS5	Q9UNA0	930 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	HERVK_113	P62684	666 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	NR5A1	Q13285	461 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	ANKRD23	Q86SG2	305 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	FAM43A	Q8N2R8	423 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	REPS2	Q8NFH8	660 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	HHIPL1	Q96JK4	782 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	ZMYND12	Q9H0C1	365 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	C6orf50	Q9HD87	102 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	CREBZF	Q9NS37	354 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	PCDHA4	Q9UN74	947 aa		32.31	■■■□□ 2.76
NFKBIA-209	ENST00000557389	MANSC4	A6NHS7	340 aa	Predicted RBP	32.3	■■■□□ 2.76
NFKBIA-209	ENST00000557389	ADCY7	P51828	1080 aa		32.3	■■■□□ 2.76
NFKBIA-209	ENST00000557389	BLID	Q8IZY5	108 aa		32.3	■■■□□ 2.76
NFKBIA-209	ENST00000557389	PTPN18	Q99952	460 aa		32.3	■■■□□ 2.76
NFKBIA-209	ENST00000557389	PNMA3	Q9UL41	463 aa		32.3	■■■□□ 2.76
NFKBIA-209	ENST00000557389	PEX10	O60683	326 aa		32.29	■■■□□ 2.76
NFKBIA-209	ENST00000557389	CYP2C8	P10632	490 aa		32.29	■■■□□ 2.76
NFKBIA-209	ENST00000557389	PLS1	Q14651	629 aa		32.29	■■■□□ 2.76
NFKBIA-209	ENST00000557389	TMEM132B	Q14DG7	1078 aa		32.29	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms