RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 LOC100289279A0A1B0GTE1 492 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 PRAMEF27A3QJZ7 478 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 DCDC2CA8MYV0 355 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 GFRA2O00451 464 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 SMAD7O15105 426 aaKnown RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 DDX3YO15523 660 aaKnown RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 SMARCA5O60264 1052 aaPredicted RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 TOMM70O94826 608 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 CTSBP07858 339 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 PHKG2P15735 406 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 PLCG1P19174 1290 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 TGFB2P61812 414 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 COL9A3Q14050 684 aaPredicted RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 PPP2R5EQ16537 467 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 FOXD4L6Q3SYB3 417 aaPredicted RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 ZNF385CQ66K41 422 aaPredicted RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 LRFN4Q6PJG9 635 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 FOXD4L3Q6VB84 417 aaPredicted RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 C12orf40Q86WS4 652 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 FMR1NBQ8N0W7 255 aaPredicted RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 RBBP8NLQ8NC74 664 aaPredicted RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 WHAMMQ8TF30 809 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 HNRNPLLQ8WVV9 542 aaKnown RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 WDR89Q96FK6 387 aaPredicted RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 PLPPR2Q96GM1 343 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 WDR18Q9BV38 432 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 RUSC1Q9BVN2 902 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 CYP4F12Q9HCS2 524 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 ACTR10Q9NZ32 417 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 MKL2Q9ULH7 1088 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 TMA7Q9Y2S6 64 aaKnown RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 POLR3KQ9Y2Y1 108 aaPredicted RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 CSADQ9Y600 493 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 CHD4Q14839 1912 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 USP47Q96K76 1375 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 KIF13BQ9NQT8 1826 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 CNTNAP4Q9C0A0 1308 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 A0A0G2JLW4 131 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 TLDC2A0PJX2 215 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 MEGF11A6BM72 1044 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 K7ELQ4 463 aaPredicted RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 POLRMTO00411 1230 aaKnown RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 GNB5O14775 395 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 KLF4O43474 513 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 ADAM11O75078 769 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 DEAF1O75398 565 aaPredicted RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 RPS6KA4O75676 772 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 HTR3BO95264 441 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 PGRP06401 933 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 MMP10P09238 476 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 DPEP1P16444 411 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 CDK8P49336 464 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 ETF1P62495 437 aaKnown RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 ERVK-24P63145 666 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 ID3Q02535 119 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 RAB33AQ14088 237 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 EIF4A2Q14240 407 aaKnown RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 BMS1Q14692 1282 aaKnown RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 ZC3H12AQ5D1E8 599 aaKnown RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 PRRT3Q5FWE3 981 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 AKAP4Q5JQC9 854 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 GIMAP6Q6P9H5 292 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 IGF2-ASQ6U949 168 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 CYFIP1Q7L576 1253 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 PODNQ7Z5L7 613 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 LSRQ86X29 649 aaPredicted RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 ZSCAN1Q8NBB4 408 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 FLAD1Q8NFF5 587 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 ZNF775Q96BV0 537 aaPredicted RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 SRPK1Q96SB4 655 aaKnown RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 TM9SF2Q99805 663 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 PLVAPQ9BX97 442 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 MRPL18Q9H0U6 180 aaKnown RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 RNF208Q9H0X6 261 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 KCNK4Q9NYG8 393 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 NOP53Q9NZM5 478 aaKnown RBP3.26□□□□□ -1.89
CPSF6-207ENST00000551516 HIF3AQ9Y2N7 669 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 SLC12A7Q9Y666 1083 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 C4BP0C0L5 1744 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 ZNF831Q5JPB2 1677 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 UBR3Q6ZT12 1888 aa3.26□□□□□ -1.89
CPSF6-207ENST00000551516 FLT4P35916 1363 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 MKI67P46013 3256 aaKnown RBP3.25□□□□□ -1.89
CPSF6-207ENST00000551516 PCDH11XQ9BZA7 1347 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 PCDH11YQ9BZA8 1340 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 USP42Q9H9J4 1324 aaKnown RBP3.25□□□□□ -1.89
CPSF6-207ENST00000551516 PKD1L3Q7Z443 1732 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 HTTP42858 3142 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 KLRG2A4D1S0 409 aaPredicted RBP3.25□□□□□ -1.89
CPSF6-207ENST00000551516 MEIS3P2A8K0S8 358 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 DLL1O00548 723 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 TM4SF5O14894 197 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 FANCGO15287 622 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 TMPRSS2O15393 492 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 CLSTN1O94985 981 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 SELPP16109 830 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 GUCY2CP25092 1073 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 POLD1P28340 1107 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 GRK4P32298 578 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 IL13P35225 146 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms