RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 AAK1Q2M2I8 961 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 ARMCX2Q7L311 632 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 RPAP2Q8IXW5 612 aaPredicted RBP13.26□□□□□ -0.29
PFDN5-212ENST00000550880 RPUSD2Q8IZ73 545 aaKnown RBP13.26□□□□□ -0.29
PFDN5-212ENST00000550880 FAM122AQ96E09 287 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 HIPK3Q9H422 1215 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 ZNF287Q9HBT7 754 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 PLXNA1Q9UIW2 1896 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 COL11A1P12107 1806 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-212ENST00000550880 NDUFB10O96000 172 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 MS4A1P11836 297 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 CYP2C18P33260 490 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 OAZ1P54368 228 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 TNFAIP2Q03169 654 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 HAUS7Q99871 368 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 AP5M1Q9H0R1 490 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 NKX2-4Q9H2Z4 354 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 RAVER2Q9HCJ3 691 aaKnown RBP13.25□□□□□ -0.29
PFDN5-212ENST00000550880 CLIP2Q9UDT6 1046 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
PFDN5-212ENST00000550880 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 SMIM22K7EJ46 135 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 CD4P01730 458 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 FDX1P10109 184 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 ADGRE1Q14246 886 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.24□□□□□ -0.29
PFDN5-212ENST00000550880 OTOP2Q7RTS6 562 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 CCDC144CPQ8IYA2 1237 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 ZNF444Q8N0Y2 327 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-212ENST00000550880 C1QTNF1Q9BXJ1 281 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 SLC38A10Q9HBR0 1119 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 PARP14Q460N5 1801 aa13.24□□□□□ -0.29
PFDN5-212ENST00000550880 ASB14A6NK59 587 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 PLA2G5P39877 138 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 NKX3-2P78367 333 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-212ENST00000550880 BEX3Q00994 111 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 ITGA7Q13683 1181 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
PFDN5-212ENST00000550880 SBK1Q52WX2 424 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 GIMAP6Q6P9H5 292 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 CXCL17Q6UXB2 119 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 MICALL1Q8N3F8 863 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
PFDN5-212ENST00000550880 CXXC1Q9P0U4 656 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-212ENST00000550880 ISY1Q9ULR0 285 aaKnown RBP13.23□□□□□ -0.29
PFDN5-212ENST00000550880 SYNPO2Q9UMS6 1093 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 MUC3AQ02505 3323 aa13.23□□□□□ -0.29
PFDN5-212ENST00000550880 ADCY6O43306 1168 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 GTPBP6O43824 516 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-212ENST00000550880 RASA1P20936 1047 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 CCL23P55773 120 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
PFDN5-212ENST00000550880 TLK2Q86UE8 772 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 PANK1Q8TE04 598 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 PUS7LQ9H0K6 701 aaKnown RBP13.22□□□□□ -0.29
PFDN5-212ENST00000550880 CHMP4BQ9H444 224 aaKnown RBP13.22□□□□□ -0.29
PFDN5-212ENST00000550880 ACAD9Q9H845 621 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 HOMER2Q9NSB8 354 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 RAPGEFL1Q9UHV5 662 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 COG6Q9Y2V7 657 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 PCDHA11Q9Y5I1 949 aa13.22□□□□□ -0.29
PFDN5-212ENST00000550880 BAZ2AQ9UIF9 1905 aaKnown RBP13.21□□□□□ -0.29
PFDN5-212ENST00000550880 ZBBXA8MT70 800 aa13.21□□□□□ -0.29
PFDN5-212ENST00000550880 TTLL1O95922 423 aa13.21□□□□□ -0.29
PFDN5-212ENST00000550880 BMP3P12645 472 aa13.21□□□□□ -0.29
PFDN5-212ENST00000550880 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-212ENST00000550880 SLC43A3Q8NBI5 491 aa13.21□□□□□ -0.29
PFDN5-212ENST00000550880 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.29
PFDN5-212ENST00000550880 MKL1Q969V6 931 aa13.21□□□□□ -0.29
PFDN5-212ENST00000550880 STRBPQ96SI9 672 aaKnown RBP13.21□□□□□ -0.29
PFDN5-212ENST00000550880 YBX2Q9Y2T7 364 aaKnown RBP13.21□□□□□ -0.29
PFDN5-212ENST00000550880 CTAGE5O15320 804 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 DYNC1LI2O43237 492 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-212ENST00000550880 APPP05067 770 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 PFKMP08237 780 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 ATP2A2P16615 1042 aaKnown RBP13.2□□□□□ -0.3
PFDN5-212ENST00000550880 TDO2P48775 406 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 STAT2P52630 851 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 RABGGTBP53611 331 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 SLFN13Q68D06 897 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 IQSEC1Q6DN90 963 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 FAM160B2Q86V87 743 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 FAM133AQ8N9E0 248 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 FGD4Q96M96 766 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 NOC4LQ9BVI4 516 aaKnown RBP13.2□□□□□ -0.3
PFDN5-212ENST00000550880 KATNBL1Q9H079 304 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 DDX19BQ9UMR2 479 aa13.2□□□□□ -0.3
PFDN5-212ENST00000550880 GNEQ9Y223 722 aaKnown RBP13.2□□□□□ -0.3
PFDN5-212ENST00000550880 Q9Y3F1 56 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms