RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 BMP3P12645 472 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 PFKFB1P16118 471 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 CDK11BP21127 795 aaKnown RBP10.66□□□□□ -0.7
GNE-206ENST00000543356 ILDR2Q71H61 639 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 HOOK2Q96ED9 719 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 RBSNQ9H1K0 784 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 DEFB129Q9H1M3 183 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 PPP2R3BQ9Y5P8 575 aa10.66□□□□□ -0.7
GNE-206ENST00000543356 PPP1R11O60927 126 aaPredicted RBP10.65□□□□□ -0.7
GNE-206ENST00000543356 YBX3P16989 372 aaKnown RBP eCLIP10.65□□□□□ -0.7
GNE-206ENST00000543356 SLC16A2P36021 539 aa10.65□□□□□ -0.7
GNE-206ENST00000543356 ATP2C1P98194 919 aaPredicted RBP10.65□□□□□ -0.7
GNE-206ENST00000543356 TRPM4Q8TD43 1214 aa10.65□□□□□ -0.7
GNE-206ENST00000543356 FERMT2Q96AC1 680 aa10.65□□□□□ -0.7
GNE-206ENST00000543356 TIGD1Q96MW7 591 aa10.65□□□□□ -0.7
GNE-206ENST00000543356 WNT7AO00755 349 aa10.65□□□□□ -0.71
GNE-206ENST00000543356 CCDC192P0DO97 292 aa10.65□□□□□ -0.71
GNE-206ENST00000543356 ECE1P42892 770 aa10.65□□□□□ -0.71
GNE-206ENST00000543356 ADCY7P51828 1080 aa10.65□□□□□ -0.71
GNE-206ENST00000543356 CAMK4Q16566 473 aa10.65□□□□□ -0.71
GNE-206ENST00000543356 REXO1Q8N1G1 1221 aaKnown RBP10.65□□□□□ -0.71
GNE-206ENST00000543356 RIC8AQ9NPQ8 531 aa10.65□□□□□ -0.71
GNE-206ENST00000543356 RNF181Q9P0P0 153 aa10.65□□□□□ -0.71
GNE-206ENST00000543356 GOLGB1Q14789 3259 aaKnown RBP10.64□□□□□ -0.71
GNE-206ENST00000543356 PITPNM2Q9BZ72 1349 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 RAD21O60216 631 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 CTNND1O60716 968 aaKnown RBP10.64□□□□□ -0.71
GNE-206ENST00000543356 ATP2B1P20020 1258 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 ORC2Q13416 577 aaPredicted RBP10.64□□□□□ -0.71
GNE-206ENST00000543356 CDC37Q16543 378 aaPredicted RBP10.64□□□□□ -0.71
GNE-206ENST00000543356 SYDE2Q5VT97 1194 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 ANGEL2Q5VTE6 544 aaKnown RBP10.64□□□□□ -0.71
GNE-206ENST00000543356 DCAF15Q66K64 600 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 RASGRP4Q8TDF6 673 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 ACER1Q8TDN7 264 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 COA7Q96BR5 231 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 CLIC6Q96NY7 704 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 GLT8D2Q9H1C3 349 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 VCPKMTQ9H867 229 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 PLA2G6O60733 806 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 NONOQ15233 471 aaKnown RBP eCLIP10.64□□□□□ -0.71
GNE-206ENST00000543356 ZNF174Q15697 407 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 QRICH1Q2TAL8 776 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 NUP88Q99567 741 aaPredicted RBP10.64□□□□□ -0.71
GNE-206ENST00000543356 FAM13BQ9NYF5 915 aa10.64□□□□□ -0.71
GNE-206ENST00000543356 TMEM232C9JQI7 657 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 ZNF202O95125 648 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 SYKP43405 635 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 ARL6IP4Q66PJ3 421 aaKnown RBP10.63□□□□□ -0.71
GNE-206ENST00000543356 ZNF341Q9BYN7 854 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 ZNF112Q9UJU3 913 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 SCAF8Q9UPN6 1271 aaKnown RBP10.63□□□□□ -0.71
GNE-206ENST00000543356 LAD1O00515 517 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 EPS15P42566 896 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
GNE-206ENST00000543356 STAT2P52630 851 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 GRIN1Q05586 938 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 TYRO3Q06418 890 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 PTGDRQ13258 359 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 KIAA1755Q5JYT7 1200 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 NBPF12Q5TAG4 269 aaPredicted RBP10.63□□□□□ -0.71
GNE-206ENST00000543356 CKAP2LQ8IYA6 745 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 ELOA2Q8IYF1 753 aaPredicted RBP10.63□□□□□ -0.71
GNE-206ENST00000543356 CUL5Q93034 780 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 ADARB2Q9NS39 739 aaKnown RBP10.63□□□□□ -0.71
GNE-206ENST00000543356 GGA3Q9NZ52 723 aa10.63□□□□□ -0.71
GNE-206ENST00000543356 PAPPA2Q9BXP8 1791 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 SSC5DA1L4H1 1573 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 LMOD1P29536 600 aaPredicted RBP10.62□□□□□ -0.71
GNE-206ENST00000543356 MRPL12P52815 198 aaKnown RBP10.62□□□□□ -0.71
GNE-206ENST00000543356 HIRAP54198 1017 aaPredicted RBP10.62□□□□□ -0.71
GNE-206ENST00000543356 INF2Q27J81 1249 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 TEX2Q8IWB9 1127 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 C4orf32Q8N8J7 132 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 AMNQ9BXJ7 453 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 CSRNP2Q9H175 543 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 KCNH3Q9ULD8 1083 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 MRVI1Q9Y6F6 885 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 DDNO94850 711 aaPredicted RBP10.62□□□□□ -0.71
GNE-206ENST00000543356 MCM7P33993 719 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 TRAF1Q13077 416 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 C9orf131Q5VYM1 1079 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 SASS6Q6UVJ0 657 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 NEK8Q86SG6 692 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 FAM160B2Q86V87 743 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.62□□□□□ -0.71
GNE-206ENST00000543356 PRR12Q9ULL5 1215 aa10.62□□□□□ -0.71
GNE-206ENST00000543356 PRPHP41219 470 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 IKQ13123 557 aaPredicted RBP10.61□□□□□ -0.71
GNE-206ENST00000543356 FAM83BQ5T0W9 1011 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 MCTP2Q6DN12 878 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 SPICE1Q8N0Z3 855 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 CHURC1Q8WUH1 139 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 ZNF830Q96NB3 372 aaPredicted RBP10.61□□□□□ -0.71
GNE-206ENST00000543356 KIAA1683Q9H0B3 1180 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 TMEM260Q9NX78 707 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 BIN2Q9UBW5 565 aaPredicted RBP10.61□□□□□ -0.71
GNE-206ENST00000543356 FEM1BQ9UK73 627 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 PCDHA1Q9Y5I3 950 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 ZC3H4Q9UPT8 1303 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms