RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MAPK1P28482 360 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 INHBCP55103 352 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 NCKAP1LP55160 1127 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 CYP4F8P98187 520 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 ATP2B2Q01814 1243 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 MVKQ03426 396 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 NMIQ13287 307 aaPredicted RBP1.85□□□□□ -2.11
COPB1-212ENST00000534771 LAPTM5Q13571 262 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 CBX2Q14781 532 aaPredicted RBP1.85□□□□□ -2.11
COPB1-212ENST00000534771 TMEM201Q5SNT2 666 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 TMC6Q7Z403 805 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 SLFN12Q8IYM2 578 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 ZNF655Q8N720 491 aaPredicted RBP1.85□□□□□ -2.11
COPB1-212ENST00000534771 DAGLBQ8NCG7 672 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 LINC00116Q8NCU8 138 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 WASF1Q92558 559 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 TCTN2Q96GX1 697 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 SPATA25Q9BR10 227 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 PLCD4Q9BRC7 762 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 TRIM8Q9BZR9 551 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 FOXP3Q9BZS1 431 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 TNFRSF10DQ9UBN6 386 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 TCFL5Q9UL49 500 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 WWC3Q9ULE0 1092 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 CORINQ9Y5Q5 1042 aa1.85□□□□□ -2.11
COPB1-212ENST00000534771 A0A1W2PQ45 241 aaPredicted RBP1.84□□□□□ -2.11
COPB1-212ENST00000534771 A0A1W2PQY0 241 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 TMEM82A0PJX8 343 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 FADS2P1A8MWK0 482 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 NUDT19A8MXV4 375 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 CHURC1-FNTBB4DL54 471 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 RLBP1P12271 317 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 PRKCAP17252 672 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 TFE3P19532 575 aaPredicted RBP1.84□□□□□ -2.11
COPB1-212ENST00000534771 EIF4BP23588 611 aaKnown RBP1.84□□□□□ -2.11
COPB1-212ENST00000534771 LIG3P49916 1009 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 FOXO4P98177 505 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 PDE4CQ08493 712 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 KIR3DS1Q14943 382 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 NR1I3Q14994 352 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 TARBP2Q15633 366 aaKnown RBP1.84□□□□□ -2.11
COPB1-212ENST00000534771 MAP3K11Q16584 847 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 HSF5Q4G112 596 aaPredicted RBP1.84□□□□□ -2.11
COPB1-212ENST00000534771 ZC3H14Q6PJT7 736 aaKnown RBP1.84□□□□□ -2.11
COPB1-212ENST00000534771 ZSCAN29Q8IWY8 852 aaPredicted RBP1.84□□□□□ -2.11
COPB1-212ENST00000534771 PHACTR4Q8IZ21 702 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 SPATA3Q8NHX4 192 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 SETDB2Q96T68 719 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 HDAC8Q9BY41 377 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 SUSD2Q9UGT4 822 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 ACSL6Q9UKU0 697 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 ZFR2Q9UPR6 939 aaKnown RBP1.84□□□□□ -2.11
COPB1-212ENST00000534771 TAF6LQ9Y6J9 622 aa1.84□□□□□ -2.11
COPB1-212ENST00000534771 A0A1B0GTL3 188 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 A0A1W2PQ27 194 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 A0A1W2PQ64 194 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 A0A1W2PQC6 194 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 A0A1W2PQD8 194 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 FKTNO75072 461 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 BPNT1O95861 308 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 SYPP08247 313 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 IGFBP6P24592 240 aaPredicted RBP1.83□□□□□ -2.12
COPB1-212ENST00000534771 LIMS1P48059 325 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 MAPKAPK2P49137 400 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 FMR1Q06787 632 aaKnown RBP eCLIP1.83□□□□□ -2.125e-7■■■■■ 34.4
COPB1-212ENST00000534771 NBPF9Q3BBW0 867 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 ZPBP2Q6X784 338 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 RPTNQ6XPR3 784 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 PALM2Q8IXS6 379 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 NUP43Q8NFH3 380 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 FNIP1Q8TF40 1166 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 EAF1Q96JC9 268 aaPredicted RBP1.83□□□□□ -2.12
COPB1-212ENST00000534771 FCRL2Q96LA5 508 aaPredicted RBP1.83□□□□□ -2.12
COPB1-212ENST00000534771 CDK5RAP1Q96SZ6 601 aaKnown RBP1.83□□□□□ -2.12
COPB1-212ENST00000534771 NELL2Q99435 816 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 KIF2CQ99661 725 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 KLC2Q9H0B6 622 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 TLR6Q9Y2C9 796 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 PMF1-BGLAPU3KQ54 211 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 PRR36Q9H6K5 1346 aa1.83□□□□□ -2.12
COPB1-212ENST00000534771 A0A1W2PQJ5 194 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 SH3D21A4FU49 640 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 KRTAP9-6A8MVA2 160 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 RGS13O14921 159 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 MSL3P1P0C860 447 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 NCAM1P13591 858 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 ENDOUP21128 410 aaKnown RBP1.82□□□□□ -2.12
COPB1-212ENST00000534771 ZC3H6P61129 1189 aaKnown RBP1.82□□□□□ -2.12
COPB1-212ENST00000534771 RNF4P78317 190 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 ZNF200P98182 395 aaPredicted RBP1.82□□□□□ -2.12
COPB1-212ENST00000534771 ABHD18Q0P651 414 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 MLECQ14165 292 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 VWA3BQ502W6 1294 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 IGFL4Q6B9Z1 124 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 LIPIQ6XZB0 460 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 TMC3Q7Z5M5 1100 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 SAPCD2Q86UD0 394 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 CCDC84Q86UT8 332 aaPredicted RBP1.82□□□□□ -2.12
COPB1-212ENST00000534771 AEBP1Q8IUX7 1158 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 CARFQ8N187 725 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms