RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 POLE2P56282 527 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 SLC7A5Q01650 507 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 FKBP15Q5T1M5 1219 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 ANKRD27Q96NW4 1050 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 PCDHA5Q9Y5H7 936 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 NCKAP5LQ9HCH0 1330 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 SALL1Q9NSC2 1324 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 SP100P23497 879 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-219ENST00000531050 HPDP32754 393 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-219ENST00000531050 ALDH5A1P51649 535 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-219ENST00000531050 GKAP1Q5VSY0 366 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-219ENST00000531050 RNF220Q5VTB9 566 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 FOXB2Q5VYV0 432 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 TRIM68Q6AZZ1 485 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 LCA5Q86VQ0 697 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 NUTM2AQ8IVF1 878 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-219ENST00000531050 PHC3Q8NDX5 983 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 KIFAP3Q92845 792 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 OPTNQ96CV9 577 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 BZW2Q9Y6E2 419 aaKnown RBP8.63□□□□□ -1.03
PTPRK-219ENST00000531050 PRR36Q9H6K5 1346 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 TNRQ92752 1358 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-219ENST00000531050 NALCNQ8IZF0 1738 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 RNF225M0QZC1 329 aaPredicted RBP8.62□□□□□ -1.03
PTPRK-219ENST00000531050 SMAPO00193 183 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 PAEPP09466 180 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 NAT1P18440 290 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 CYP11B2P19099 503 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 KCNJ2P63252 427 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 PPARDQ03181 441 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 ENOX2Q16206 610 aaKnown RBP8.62□□□□□ -1.03
PTPRK-219ENST00000531050 CCDC102BQ68D86 513 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 CCDC70Q6NSX1 233 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 SYNE3Q6ZMZ3 975 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 CNGA4Q8IV77 575 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 RAPGEF5Q92565 580 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 COG3Q96JB2 828 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 NDNQ99608 321 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 ARPC5LQ9BPX5 153 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 MOV10L1Q9BXT6 1211 aaKnown RBP8.62□□□□□ -1.03
PTPRK-219ENST00000531050 SPATA7Q9P0W8 599 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 CEP131Q9UPN4 1083 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 AGAP1Q9UPQ3 857 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 LRRC42Q9Y546 428 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 ADAMTS13Q76LX8 1427 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 ANKARQ7Z5J8 1434 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 JCADQ9P266 1359 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 A8MUI8 341 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 PHF20L1A8MW92 1017 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 FAM153BP0C7A2 387 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 NQO1P15559 274 aaKnown RBP8.62□□□□□ -1.03
PTPRK-219ENST00000531050 ATP2A2P16615 1042 aaKnown RBP8.62□□□□□ -1.03
PTPRK-219ENST00000531050 TMOD1P28289 359 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 BPIFB4P59827 614 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 FAM153CQ494X1 144 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 HAUS3Q68CZ6 603 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 OR52E8Q6IFG1 317 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 IQCEQ6IPM2 695 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 ZNF572Q7Z3I7 529 aaPredicted RBP8.62□□□□□ -1.03
PTPRK-219ENST00000531050 LINS1Q8NG48 757 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
PTPRK-219ENST00000531050 RPS6KC1Q96S38 1066 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 TAF1DQ9H5J8 278 aaPredicted RBP8.62□□□□□ -1.03
PTPRK-219ENST00000531050 HMG20BQ9P0W2 317 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 STIM2Q9P246 746 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 FAM153AQ9UHL3 310 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 TFR2Q9UP52 801 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 TMEM98Q9Y2Y6 226 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 CCDC61Q9Y6R9 512 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 TMEM2Q9UHN6 1383 aa8.62□□□□□ -1.03
PTPRK-219ENST00000531050 A0A0D9SFI3 127 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 IFIT3O14879 490 aaKnown RBP8.61□□□□□ -1.03
PTPRK-219ENST00000531050 CAPN15O75808 1086 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 DESP17661 470 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 PAK2Q13177 524 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 RRS1Q15050 365 aaKnown RBP8.61□□□□□ -1.03
PTPRK-219ENST00000531050 CDC37Q16543 378 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-219ENST00000531050 IFI16Q16666 785 aaKnown RBP8.61□□□□□ -1.03
PTPRK-219ENST00000531050 SLC9C2Q5TAH2 1124 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 SHC4Q6S5L8 630 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 CYP26C1Q6V0L0 522 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 PPP1R42Q7Z4L9 355 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 CREG2Q8IUH2 290 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 MREGQ8N565 214 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 ARFGAP2Q8N6H7 521 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 CCDC155Q8N6L0 562 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 LRRC2Q9BYS8 371 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 TMBIM4Q9HC24 238 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 ABHD10Q9NUJ1 306 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■■■■□ 26.2
PTPRK-219ENST00000531050 ADAM22Q9P0K1 906 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 ADD3Q9UEY8 706 aaKnown RBP8.61□□□□□ -1.03
PTPRK-219ENST00000531050 MAN1B1Q9UKM7 699 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 TMCO1Q9UM00 188 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 GMEB1Q9Y692 573 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 ROBO2Q9HCK4 1378 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 MED23Q9ULK4 1368 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 RGPD1P0DJD0 1748 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms