RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 NCOA7Q8NI08 942 aa25■■□□□ 1.59
UBE2D3-229ENST00000510129 RANBP17Q9H2T7 1088 aaKnown RBP25■■□□□ 1.59
UBE2D3-229ENST00000510129 DDX20Q9UHI6 824 aaKnown RBP25■■□□□ 1.59
UBE2D3-229ENST00000510129 PFASO15067 1338 aa24.99■■□□□ 1.59
UBE2D3-229ENST00000510129 ZNF536O15090 1300 aa24.99■■□□□ 1.59
UBE2D3-229ENST00000510129 ICAM1P05362 532 aa24.99■■□□□ 1.59
UBE2D3-229ENST00000510129 PGK2P07205 417 aa24.99■■□□□ 1.59
UBE2D3-229ENST00000510129 ENAHQ8N8S7 591 aaPredicted RBP24.99■■□□□ 1.59
UBE2D3-229ENST00000510129 TINF2Q9BSI4 451 aa24.99■■□□□ 1.59
UBE2D3-229ENST00000510129 ESYT1Q9BSJ8 1104 aa24.99■■□□□ 1.59
UBE2D3-229ENST00000510129 FRMPD2Q68DX3 1309 aaPredicted RBP24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 DNAJC25-GNG10A0A024R161 153 aa24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 ERICH2A1L162 156 aa24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 ASPRV1Q53RT3 343 aa24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 IFIT1BQ5T764 474 aaKnown RBP24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 LHX8Q68G74 356 aa24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 CHMP4CQ96CF2 233 aa24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 GPCPD1Q9NPB8 672 aa24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 RNF146Q9NTX7 359 aa24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 CNPY2Q9Y2B0 182 aa24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 PLXNA1Q9UIW2 1896 aa24.98■■□□□ 1.59
UBE2D3-229ENST00000510129 SYNGAP1Q96PV0 1343 aa24.97■■□□□ 1.59
UBE2D3-229ENST00000510129 SEPT4O43236 478 aa24.97■■□□□ 1.59
UBE2D3-229ENST00000510129 AGBL1Q96MI9 1066 aa24.97■■□□□ 1.59
UBE2D3-229ENST00000510129 TRERF1Q96PN7 1200 aa24.97■■□□□ 1.59
UBE2D3-229ENST00000510129 CCPG1Q9ULG6 757 aa24.97■■□□□ 1.59
UBE2D3-229ENST00000510129 RBM8AQ9Y5S9 174 aaKnown RBP24.97■■□□□ 1.59
UBE2D3-229ENST00000510129 ALAS1P13196 640 aa24.96■■□□□ 1.59
UBE2D3-229ENST00000510129 TTBK2Q6IQ55 1244 aa24.96■■□□□ 1.59
UBE2D3-229ENST00000510129 CCDC174Q6PII3 467 aa24.96■■□□□ 1.59
UBE2D3-229ENST00000510129 MAMDC4Q6UXC1 1216 aa24.96■■□□□ 1.59
UBE2D3-229ENST00000510129 DPF3Q92784 378 aa24.96■■□□□ 1.59
UBE2D3-229ENST00000510129 MTA3Q9BTC8 594 aa24.96■■□□□ 1.59
UBE2D3-229ENST00000510129 HOMER2Q9NSB8 354 aa24.96■■□□□ 1.59
UBE2D3-229ENST00000510129 PDE4DIPQ5VU43 2346 aa24.96■■□□□ 1.59
UBE2D3-229ENST00000510129 E7EWF7 191 aa24.95■■□□□ 1.58
UBE2D3-229ENST00000510129 CDC45O75419 566 aa24.95■■□□□ 1.58
UBE2D3-229ENST00000510129 SLC16A2P36021 539 aa24.95■■□□□ 1.58
UBE2D3-229ENST00000510129 RASGRP2Q7LDG7 609 aa24.95■■□□□ 1.58
UBE2D3-229ENST00000510129 PAWRQ96IZ0 340 aaKnown RBP24.95■■□□□ 1.58
UBE2D3-229ENST00000510129 C11orf49Q9H6J7 331 aa24.95■■□□□ 1.58
UBE2D3-229ENST00000510129 TNRC18O15417 2968 aaPredicted RBP24.95■■□□□ 1.58
UBE2D3-229ENST00000510129 WDR19Q8NEZ3 1342 aa24.94■■□□□ 1.58
UBE2D3-229ENST00000510129 PARP1P09874 1014 aaKnown RBP24.94■■□□□ 1.58
UBE2D3-229ENST00000510129 RNF20Q5VTR2 975 aa24.94■■□□□ 1.58
UBE2D3-229ENST00000510129 ARRDC4Q8NCT1 418 aa24.94■■□□□ 1.58
UBE2D3-229ENST00000510129 LSG1Q9H089 658 aaKnown RBP24.94■■□□□ 1.58
UBE2D3-229ENST00000510129 ANO2Q9NQ90 1003 aa24.94■■□□□ 1.58
UBE2D3-229ENST00000510129 NR2E3Q9Y5X4 410 aa24.94■■□□□ 1.58
UBE2D3-229ENST00000510129 SEC23AQ15436 765 aa24.93■■□□□ 1.58
UBE2D3-229ENST00000510129 TRPV1Q8NER1 839 aa24.93■■□□□ 1.58
UBE2D3-229ENST00000510129 MAF1Q9H063 256 aa24.93■■□□□ 1.58
UBE2D3-229ENST00000510129 POTEB2H3BUK9 544 aa24.92■■□□□ 1.58
UBE2D3-229ENST00000510129 IFIT3O14879 490 aaKnown RBP24.92■■□□□ 1.58
UBE2D3-229ENST00000510129 A1CFQ9NQ94 594 aaKnown RBP24.92■■□□□ 1.58
UBE2D3-229ENST00000510129 FRMPD3Q5JV73 1810 aa24.91■■□□□ 1.58
UBE2D3-229ENST00000510129 ASB14A6NK59 587 aa24.91■■□□□ 1.58
UBE2D3-229ENST00000510129 DNM1LO00429 736 aa24.91■■□□□ 1.58
UBE2D3-229ENST00000510129 AKR1A1P14550 325 aa24.91■■□□□ 1.58
UBE2D3-229ENST00000510129 CYB5R4Q7L1T6 521 aa24.91■■□□□ 1.58
UBE2D3-229ENST00000510129 ABHD16BQ9H3Z7 469 aa24.91■■□□□ 1.58
UBE2D3-229ENST00000510129 LOC102724159A0A0B4J2E5 919 aa24.9■■□□□ 1.58
UBE2D3-229ENST00000510129 EVI5O60447 810 aa24.9■■□□□ 1.58
UBE2D3-229ENST00000510129 RARBP10826 455 aa24.9■■□□□ 1.58
UBE2D3-229ENST00000510129 SNAP25P60880 206 aa24.9■■□□□ 1.58
UBE2D3-229ENST00000510129 WTAPQ15007 396 aa24.9■■□□□ 1.58
UBE2D3-229ENST00000510129 PWP2Q15269 919 aaKnown RBP24.9■■□□□ 1.58
UBE2D3-229ENST00000510129 FAM133AQ8N9E0 248 aa24.9■■□□□ 1.58
UBE2D3-229ENST00000510129 DIS3LQ8TF46 1054 aaKnown RBP24.9■■□□□ 1.58
UBE2D3-229ENST00000510129 GOLGA8HP0CJ92 632 aa24.89■■□□□ 1.58
UBE2D3-229ENST00000510129 MNX1P50219 401 aaPredicted RBP24.89■■□□□ 1.58
UBE2D3-229ENST00000510129 TMTC2Q8N394 836 aa24.89■■□□□ 1.58
UBE2D3-229ENST00000510129 PPP4R2Q9NY27 417 aa24.89■■□□□ 1.58
UBE2D3-229ENST00000510129 CYP39A1Q9NYL5 469 aa24.89■■□□□ 1.58
UBE2D3-229ENST00000510129 KBTBD13C9JR72 458 aa24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 COL6A1P12109 1028 aa24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 MCM5P33992 734 aa24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 TRAF1Q13077 416 aa24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 NECTIN1Q15223 517 aa24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 TMEM67Q5HYA8 995 aa24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 PRAMEF19Q5SWL8 479 aa24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 MB21D2Q8IYB1 491 aaPredicted RBP24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 MPHOSPH6Q99547 160 aaKnown RBP24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 ADD3Q9UEY8 706 aaKnown RBP24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 FAM184BQ9ULE4 1060 aa24.88■■□□□ 1.57
UBE2D3-229ENST00000510129 SLC27A2O14975 620 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 DHX16O60231 1041 aaKnown RBP24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 ZNF865P0CJ78 1059 aaPredicted RBP24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 MUM1L1Q5H9M0 696 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 CREB3L3Q68CJ9 461 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 NSMFQ6X4W1 530 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 STOX1Q6ZVD7 989 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 ARMCX2Q7L311 632 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 CATIPQ7Z7H3 387 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 SKAP1Q86WV1 359 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 RGS22Q8NE09 1264 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 TMEM87BQ96K49 555 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 UBA5Q9GZZ9 404 aa24.87■■□□□ 1.57
UBE2D3-229ENST00000510129 ABCB11O95342 1321 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms