RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 PCDHA1Q9Y5I3 950 aa8.14□□□□□ -1.11
GPATCH4-209ENST00000498641 SBF1O95248 1867 aa8.14□□□□□ -1.11
GPATCH4-209ENST00000498641 SRCAPQ6ZRS2 3230 aa8.14□□□□□ -1.11
GPATCH4-209ENST00000498641 ESYT2A0FGR8 921 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 FAM205CA6NFA0 338 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 POTECB2RU33 542 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 ADAMTS3O15072 1205 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 WDR46O15213 610 aaKnown RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 PLA2G6O60733 806 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 PPP1R11O60927 126 aaPredicted RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 MARCKSP29966 332 aaPredicted RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 TOB1P50616 345 aaPredicted RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 BACE1P56817 501 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 ZNF174Q15697 407 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 NPY5RQ15761 445 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 USH1GQ495M9 461 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 NOM1Q5C9Z4 860 aaKnown RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 EARS2Q5JPH6 523 aaKnown RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 TTC38Q5R3I4 469 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 NOL9Q5SY16 702 aaKnown RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 CCDC174Q6PII3 467 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 CCAR1Q8IX12 1150 aaKnown RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 REXO1Q8N1G1 1221 aaKnown RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 RASGRP4Q8TDF6 673 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 CUL5Q93034 780 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 TNFRSF25Q93038 417 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 PGBD1Q96JS3 809 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 TANGO6Q9C0B7 1094 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 GLT8D2Q9H1C3 349 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 PSTPIP2Q9H939 334 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 RRAGCQ9HB90 399 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 RIC8AQ9NPQ8 531 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 EMILIN3Q9NT22 766 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 TMOD4Q9NZQ9 345 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 BIN2Q9UBW5 565 aaPredicted RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 PCDHA7Q9UN72 937 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 PCDHB6Q9Y5E3 794 aa8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 GREB1LQ9C091 1923 aaPredicted RBP8.13□□□□□ -1.11
GPATCH4-209ENST00000498641 MYH8P13535 1937 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 C19orf81C9J6K1 198 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 PPP6R2O75170 966 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 BMP15O95972 392 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 TRAPPC10P48553 1259 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 VGLL4Q14135 290 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 GSE1Q14687 1217 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 NONOQ15233 471 aaKnown RBP eCLIP8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 PTPAQ15257 358 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 INF2Q27J81 1249 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 JAKMIP3Q5VZ66 844 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 ADALQ6DHV7 355 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 CCDC73Q6ZRK6 1079 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 ARMC9Q7Z3E5 817 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 FSIP1Q8NA03 581 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 PRPF38AQ8NAV1 312 aaKnown RBP8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 SLF1Q9BQI6 1058 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 TMEM260Q9NX78 707 aa8.12□□□□□ -1.11
GPATCH4-209ENST00000498641 GOLGB1Q14789 3259 aaKnown RBP8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 SSC5DA1L4H1 1573 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 A0A1W2PQ27 194 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 A0A1W2PQ64 194 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 A0A1W2PQD8 194 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 M0R2N6 131 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 CUTAO60888 179 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 ZBED4O75132 1171 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 FLOT1O75955 427 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 LIG1P18858 919 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 VCAM1P19320 739 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 MCM7P33993 719 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 HMGCS2P54868 508 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 DGKZQ13574 1117 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 UBE2SQ16763 222 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 ZSCAN23Q3MJ62 389 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 CCDC183Q5T5S1 534 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 MAP1SQ66K74 1059 aaPredicted RBP8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 ANKRD13AQ8IZ07 590 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 KRI1Q8N9T8 703 aaKnown RBP8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 RBM46Q8TBY0 533 aaKnown RBP8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 ZNF526Q8TF50 670 aaPredicted RBP8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 MRPS27Q92552 414 aaKnown RBP8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 RANBP17Q9H2T7 1088 aaKnown RBP8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 RPAP3Q9H6T3 665 aaPredicted RBP8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 ZNF408Q9H9D4 720 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 ELP3Q9H9T3 547 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 FBXO28Q9NVF7 368 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 TMEM63CQ9P1W3 806 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 AFG3L2Q9Y4W6 797 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 SNCAIPQ9Y6H5 919 aa8.11□□□□□ -1.11
GPATCH4-209ENST00000498641 CCNT1O60563 726 aaKnown RBP8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 LETM1O95202 739 aaPredicted RBP8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 POTEIP0CG38 1075 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 POTEJP0CG39 1038 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 CMA1P23946 247 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 PTGDRQ13258 359 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 LETM2Q2VYF4 491 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 MCTP2Q6DN12 878 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 MOB2Q70IA6 237 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 NEK8Q86SG6 692 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms