RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 NFE2L2Q16236 605 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 ELOA3BQ3SY89 546 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-210ENST00000485247 ELOA3Q8NG57 546 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 STK32AQ8WU08 396 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 MYLIPQ8WY64 445 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 ZKSCAN4Q969J2 545 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-210ENST00000485247 C11orf49Q9H6J7 331 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 TDRD3Q9H7E2 651 aaKnown RBP6.89□□□□□ -1.31
PTPN4-210ENST00000485247 CD209Q9NNX6 404 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 BSDC1Q9NW68 430 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-210ENST00000485247 KLK14Q9P0G3 267 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 ZNF70Q9UC06 446 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-210ENST00000485247 KCNH4Q9UQ05 1017 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 LEMD3Q9Y2U8 911 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 FAM205AQ6ZU69 1335 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 DLG5Q8TDM6 1919 aa6.89□□□□□ -1.31
PTPN4-210ENST00000485247 ECM29Q5VYK3 1845 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 ADARB2-AS1A8MUL3 147 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 TGFBR3LH3BV60 316 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 GNB5O14775 395 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 PCCAP05165 728 aaPredicted RBP6.88□□□□□ -1.31
PTPN4-210ENST00000485247 CYP2C8P10632 490 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 FOSL2P15408 326 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 KCNJ4P48050 445 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 PPIL2Q13356 520 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 FKBP5Q13451 457 aaPredicted RBP6.88□□□□□ -1.31
PTPN4-210ENST00000485247 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
PTPN4-210ENST00000485247 IER5Q5VY09 327 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 ANKRD23Q86SG2 305 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 TNFRSF25Q93038 417 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 WRNIP1Q96S55 665 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 MYD88Q99836 296 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPN4-210ENST00000485247 SEMA6BQ9H3T3 888 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 GREM2Q9H772 168 aa6.88□□□□□ -1.31
PTPN4-210ENST00000485247 EYSQ5T1H1 3165 aa6.87□□□□□ -1.31
PTPN4-210ENST00000485247 TNPO2O14787 897 aaKnown RBP6.87□□□□□ -1.31
PTPN4-210ENST00000485247 TNNI2P48788 182 aa6.87□□□□□ -1.31
PTPN4-210ENST00000485247 CTSWP56202 376 aa6.87□□□□□ -1.31
PTPN4-210ENST00000485247 HIF1AQ16665 826 aa6.87□□□□□ -1.31
PTPN4-210ENST00000485247 TRIM11Q96F44 468 aa6.87□□□□□ -1.31
PTPN4-210ENST00000485247 PLEKHF1Q96S99 279 aa6.87□□□□□ -1.31
PTPN4-210ENST00000485247 PARK7Q99497 189 aaKnown RBP6.87□□□□□ -1.31
PTPN4-210ENST00000485247 DBF4Q9UBU7 674 aaPredicted RBP6.87□□□□□ -1.31
PTPN4-210ENST00000485247 STARD13Q9Y3M8 1113 aa6.87□□□□□ -1.31
PTPN4-210ENST00000485247 COL2A1P02458 1487 aaPredicted RBP6.86□□□□□ -1.31
PTPN4-210ENST00000485247 PFASO15067 1338 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 SNAP23O00161 211 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 PROCP04070 461 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 PPP2R1AP30153 589 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 IGHMBP2P38935 993 aaKnown RBP6.86□□□□□ -1.31
PTPN4-210ENST00000485247 PPATQ06203 517 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 OCLNQ16625 522 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 SWI5Q1ZZU3 235 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 CCDC191Q8NCU4 936 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 TTLL11Q8NHH1 800 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 BHMTQ93088 406 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 MYO19Q96H55 970 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 PRIMPOLQ96LW4 560 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 LBHD1Q9BQE6 289 aaPredicted RBP6.86□□□□□ -1.31
PTPN4-210ENST00000485247 ANKRD2Q9GZV1 360 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 TTYH1Q9H313 450 aaPredicted RBP6.86□□□□□ -1.31
PTPN4-210ENST00000485247 CWC25Q9NXE8 425 aaPredicted RBP6.86□□□□□ -1.31
PTPN4-210ENST00000485247 LRFN2Q9ULH4 789 aa6.86□□□□□ -1.31
PTPN4-210ENST00000485247 PRUNE2Q8WUY3 3088 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 SPEF2Q9C093 1822 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 MAPK8IP3Q9UPT6 1336 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 PRMT3O60678 531 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 ATG7O95352 703 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 IGHA1P01876 353 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 INPP5BP32019 993 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 ADH7P40394 386 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 CACNB3P54284 484 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 FKBP1AP62942 108 aaKnown RBP6.85□□□□□ -1.31
PTPN4-210ENST00000485247 COL9A3Q14050 684 aaPredicted RBP6.85□□□□□ -1.31
PTPN4-210ENST00000485247 MIGA2Q7L4E1 593 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 DZIP1LQ8IYY4 767 aaKnown RBP6.85□□□□□ -1.31
PTPN4-210ENST00000485247 USP38Q8NB14 1042 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 MPHOSPH8Q99549 860 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 SPOCK3Q9BQ16 436 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 BABAM1Q9NWV8 329 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 HYPKQ9NX55 129 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 TTF2Q9UNY4 1162 aaKnown RBP6.85□□□□□ -1.31
PTPN4-210ENST00000485247 LAS1LQ9Y4W2 734 aaKnown RBP6.85□□□□□ -1.31
PTPN4-210ENST00000485247 MGAMO43451 1857 aa6.85□□□□□ -1.31
PTPN4-210ENST00000485247 DDX60LQ5H9U9 1706 aaKnown RBP6.84□□□□□ -1.31
PTPN4-210ENST00000485247 SYNGAP1Q96PV0 1343 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 TAF5LO75529 589 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 ALBP02768 609 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 HMGCRP04035 888 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 IL1R1P14778 569 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 IDH3AP50213 366 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 RIPK4P57078 832 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 CHRNDQ07001 517 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 MOGSQ13724 837 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 LRRC26Q2I0M4 334 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 TMEM164Q5U3C3 297 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 C8orf86Q6ZUL3 223 aa6.84□□□□□ -1.31
PTPN4-210ENST00000485247 COA7Q96BR5 231 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms