RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 RNF181Q9P0P0 153 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 KIAA1024Q9UPX6 916 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 NRXN3Q9Y4C0 1643 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L15C9J2P7 530 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L13C9JLJ4 530 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L11C9JVI0 530 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L18D6R9N7 530 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L22D6RA61 530 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L17D6RBQ6 530 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L19D6RCP7 530 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L20D6RJB6 530 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 GCNT3O95395 438 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L24Q0WX57 530 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 USP17L6PQ6QN14 398 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 MIER3Q7Z3K6 550 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 SLC39A2Q9NP94 309 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 LONP1P36776 959 aaKnown RBP13.24□□□□□ -0.29
SGSM3-209ENST00000478085 SPP2Q13103 211 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 SMYD4Q8IYR2 804 aaPredicted RBP13.24□□□□□ -0.29
SGSM3-209ENST00000478085 GTPBP4Q9BZE4 634 aaKnown RBP13.24□□□□□ -0.29
SGSM3-209ENST00000478085 ACBD3Q9H3P7 528 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 SPON1Q9HCB6 807 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 PNMA6FA0A0J9YX94 578 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 RAPGEF1Q13905 1077 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 DPCR1Q3MIW9 517 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 LONRF3Q496Y0 759 aa13.24□□□□□ -0.29
SGSM3-209ENST00000478085 WDR19Q8NEZ3 1342 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 MACROD2A1Z1Q3 448 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 DDR1Q08345 913 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 USP37Q86T82 979 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 SRBD1Q8N5C6 995 aaKnown RBP13.23□□□□□ -0.29
SGSM3-209ENST00000478085 GLG1Q92896 1179 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 WRNIP1Q96S55 665 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 ZHX2Q9Y6X8 837 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 SHPRHQ149N8 1683 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 PRPF4BQ13523 1007 aaKnown RBP13.23□□□□□ -0.29
SGSM3-209ENST00000478085 PFKFB3Q16875 520 aaPredicted RBP13.23□□□□□ -0.29
SGSM3-209ENST00000478085 FAM83BQ5T0W9 1011 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 PRAMEF18Q5VWM3 479 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 OSBPL5Q9H0X9 879 aaPredicted RBP13.23□□□□□ -0.29
SGSM3-209ENST00000478085 ZNF500O60304 480 aaPredicted RBP13.23□□□□□ -0.29
SGSM3-209ENST00000478085 PAFAH1B1P43034 410 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 SMTNP53814 917 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 MCF2L2Q86YR7 1114 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 SUGT1Q9Y2Z0 365 aa13.23□□□□□ -0.29
SGSM3-209ENST00000478085 PIK3C2AO00443 1686 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 AKR1B15C9JRZ8 316 aaPredicted RBP13.22□□□□□ -0.29
SGSM3-209ENST00000478085 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.296e-8■■■■■ 34.2
SGSM3-209ENST00000478085 ALDH8A1Q9H2A2 487 aaPredicted RBP13.22□□□□□ -0.29
SGSM3-209ENST00000478085 FRMD4BQ9Y2L6 1034 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 MRVI1Q9Y6F6 885 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 RASA3Q14644 834 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 ADGRA1Q86SQ6 560 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 TBC1D5Q92609 795 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 BAG1Q99933 345 aaPredicted RBP13.22□□□□□ -0.29
SGSM3-209ENST00000478085 MTA3Q9BTC8 594 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
SGSM3-209ENST00000478085 CNOT7Q9UIV1 285 aaKnown RBP13.22□□□□□ -0.29
SGSM3-209ENST00000478085 POLRMTO00411 1230 aaKnown RBP13.22□□□□□ -0.29
SGSM3-209ENST00000478085 TTBK2Q6IQ55 1244 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 GUCA1BQ9UMX6 200 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 KIF1AQ12756 1690 aa13.22□□□□□ -0.29
SGSM3-209ENST00000478085 GOLGA6L9A6NEM1 432 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 PSMD14O00487 310 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 CCDC175P0C221 793 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 LRCH2Q5VUJ6 765 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.29
SGSM3-209ENST00000478085 NFAT5O94916 1531 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 MEIS1O00470 390 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 KRT9P35527 623 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 PPP1R2P41236 205 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
SGSM3-209ENST00000478085 GNPTABQ3T906 1256 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 GRIPAP1Q4V328 841 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 SLFN12Q8IYM2 578 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 RGPD8O14715 1765 aaPredicted RBP13.21□□□□□ -0.29
SGSM3-209ENST00000478085 GPR75-ASB3A0A0A6YYF3 556 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 RPN1P04843 607 aaKnown RBP13.21□□□□□ -0.29
SGSM3-209ENST00000478085 SBK1Q52WX2 424 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 STYK1Q6J9G0 422 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 EEPD1Q7L9B9 569 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 LRP10Q7Z4F1 713 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 IFT74Q96LB3 600 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 MLXIPQ9HAP2 919 aa13.21□□□□□ -0.29
SGSM3-209ENST00000478085 FMN2Q9NZ56 1722 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 KIF28PB7ZC32 967 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 ZBTB5O15062 677 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.3
SGSM3-209ENST00000478085 EXOC3O60645 756 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.3
SGSM3-209ENST00000478085 FAM193AP78312 1265 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 PTPN21Q16825 1174 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 MCTP2Q6DN12 878 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 CNGA4Q8IV77 575 aa13.21□□□□□ -0.3
SGSM3-209ENST00000478085 MICALL2Q8IY33 904 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms