RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 MANSC4A6NHS7 340 aaPredicted RBP13.68□□□□□ -0.22
RNF13-208ENST00000467996 RASSF10A6NK89 507 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
RNF13-208ENST00000467996 BTBD19C9JJ37 291 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 PDCP20941 246 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 SYT1P21579 422 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 IRX3P78415 501 aaPredicted RBP13.68□□□□□ -0.22
RNF13-208ENST00000467996 PABPC4Q13310 644 aaKnown RBP eCLIP13.68□□□□□ -0.22
RNF13-208ENST00000467996 COG2Q14746 738 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 LARP1BQ659C4 914 aaKnown RBP13.68□□□□□ -0.22
RNF13-208ENST00000467996 CYP4F22Q6NT55 531 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 PAXIP1Q6ZW49 1069 aaPredicted RBP13.68□□□□□ -0.22
RNF13-208ENST00000467996 HEATR3Q7Z4Q2 680 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 ANKRD23Q86SG2 305 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 SHISA4Q96DD7 197 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 C8orf76Q96K31 380 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 GJB4Q9NTQ9 266 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 VPS54Q9P1Q0 977 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 SLC45A1Q9Y2W3 748 aa13.68□□□□□ -0.22
RNF13-208ENST00000467996 hCG_1984214I3L0E3 225 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 STXBP3O00186 592 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 VWA5AO00534 786 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 PKP1Q13835 747 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 OTUD7BQ6GQQ9 843 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 TYW1BQ6NUM6 668 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 CCDC174Q6PII3 467 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 ZNF713Q8N859 430 aaPredicted RBP13.67□□□□□ -0.22
RNF13-208ENST00000467996 ASCC2Q9H1I8 757 aaPredicted RBP13.67□□□□□ -0.22
RNF13-208ENST00000467996 SLC38A10Q9HBR0 1119 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 BARHL2Q9NY43 387 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 PNMA3Q9UL41 463 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 ADAMTS5Q9UNA0 930 aa13.67□□□□□ -0.22
RNF13-208ENST00000467996 ZNF536O15090 1300 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 VPS37CA5D8V6 355 aaPredicted RBP13.66□□□□□ -0.22
RNF13-208ENST00000467996 PDHXO00330 501 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 STX6O43752 255 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 FDX1P10109 184 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 TAL1P17542 331 aaPredicted RBP13.66□□□□□ -0.22
RNF13-208ENST00000467996 XBP1P17861 261 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 OSBPP22059 807 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 GUCY1B3Q02153 619 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 GRM1Q13255 1194 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 TRIM29Q14134 588 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 DEFB115Q30KQ5 88 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 KRT40Q6A162 431 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 FBXO11Q86XK2 927 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 FAM43AQ8N2R8 423 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 REPS2Q8NFH8 660 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 COA7Q96BR5 231 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 PTPN18Q99952 460 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 AMNQ9BXJ7 453 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 SH3GLB2Q9NR46 395 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 HOXC10Q9NYD6 342 aa13.66□□□□□ -0.22
RNF13-208ENST00000467996 CIZ1Q9ULV3 898 aaPredicted RBP13.66□□□□□ -0.22
RNF13-208ENST00000467996 H3BQV1 296 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 IGF2BP3O00425 579 aaKnown RBP eCLIP13.65□□□□□ -0.22
RNF13-208ENST00000467996 ZBED4O75132 1171 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 ICAM1P05362 532 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 NAPAP54920 295 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 HERVK_113P62684 666 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 USH1GQ495M9 461 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 PPP1R18Q6NYC8 613 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 LBX2Q6XYB7 198 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 RGS22Q8NE09 1264 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 CCDC148Q8NFR7 591 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 CAPNS2Q96L46 248 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 P2RX7Q99572 595 aaKnown RBP13.65□□□□□ -0.22
RNF13-208ENST00000467996 PHF20Q9BVI0 1012 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
RNF13-208ENST00000467996 KCNJ14Q9UNX9 436 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 MTMR6Q9Y217 621 aa13.65□□□□□ -0.22
RNF13-208ENST00000467996 CTDP1Q9Y5B0 961 aaPredicted RBP13.65□□□□□ -0.22
RNF13-208ENST00000467996 MMP1P03956 469 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 CYP2C8P10632 490 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 HSPA6P17066 643 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 OAZ1P54368 228 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 SREBF2Q12772 1141 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 NOGQ13253 232 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 TMEM132BQ14DG7 1078 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 FAM177A1Q8N128 213 aaPredicted RBP13.64□□□□□ -0.23
RNF13-208ENST00000467996 CCDC12Q8WUD4 166 aaPredicted RBP13.64□□□□□ -0.23
RNF13-208ENST00000467996 AGBL1Q96MI9 1066 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 ZIC5Q96T25 663 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 CHMP5Q9NZZ3 219 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 ZNF214Q9UL59 606 aaPredicted RBP13.64□□□□□ -0.23
RNF13-208ENST00000467996 CCPG1Q9ULG6 757 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 PCDHA1Q9Y5I3 950 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 PLXNB2O15031 1838 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 ABCB11O95342 1321 aa13.64□□□□□ -0.23
RNF13-208ENST00000467996 WDR33Q9C0J8 1336 aaKnown RBP13.64□□□□□ -0.23
RNF13-208ENST00000467996 LCTP09848 1927 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 ESYT2A0FGR8 921 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 BRD1O95696 1058 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
RNF13-208ENST00000467996 INHBEP58166 350 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 NLRP5P59047 1200 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms