RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 POSTNQ15063 836 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 NONOQ15233 471 aaKnown RBP eCLIP20.15■□□□□ 0.82
LMNA-208ENST00000448611 KANK3Q6NY19 840 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 PPP1R18Q6NYC8 613 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 GMCL1P1Q8NEA9 526 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 JDP2Q8WYK2 163 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.15■□□□□ 0.821e-6■■■■■ 53.3
LMNA-208ENST00000448611 BECN2A8MW95 431 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 USP17L10C9JJH3 530 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 ZBTB5O15062 677 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 PTMAP06454 111 aaKnown RBP20.15■□□□□ 0.82
LMNA-208ENST00000448611 SLC1A4P43007 532 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 REXO1Q8N1G1 1221 aaKnown RBP20.15■□□□□ 0.82
LMNA-208ENST00000448611 AOPEPQ8N6M6 819 aa20.15■□□□□ 0.82
LMNA-208ENST00000448611 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.15■□□□□ 0.82
LMNA-208ENST00000448611 PRR29P0C7W0 189 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 GPR162Q16538 588 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 NT5DC1Q5TFE4 455 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 SARM1Q6SZW1 724 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 PLA2G4DQ86XP0 818 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 VEZTQ9HBM0 779 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 F5H6K3 240 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 LONP1P36776 959 aaKnown RBP20.14■□□□□ 0.81
LMNA-208ENST00000448611 SARSP49591 514 aaKnown RBP20.14■□□□□ 0.81
LMNA-208ENST00000448611 ADCY7P51828 1080 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 KLRC3Q07444 240 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 ISM2Q6H9L7 571 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 ARHGAP27Q6ZUM4 889 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 FAM83AQ86UY5 434 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 DHX58Q96C10 678 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 TMEM60Q9H2L4 133 aa20.14■□□□□ 0.81
LMNA-208ENST00000448611 BIN2Q9UBW5 565 aaPredicted RBP20.14■□□□□ 0.81
LMNA-208ENST00000448611 WNT10BO00744 389 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 SLFN14P0C7P3 912 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 ZNF75DP51815 510 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 TNIP1Q15025 636 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 SH3RF1Q7Z6J0 888 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 NEK8Q86SG6 692 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 GRAMD1CQ8IYS0 662 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 GMCL1Q96IK5 515 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 TMEM260Q9NX78 707 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 SYNPO2Q9UMS6 1093 aa20.13■□□□□ 0.81
LMNA-208ENST00000448611 LAD1O00515 517 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 JAKMIP3Q5VZ66 844 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 SPATA20Q8TB22 786 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 TRIM5Q9C035 493 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 TMEM39BQ9GZU3 492 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 MYOZ2Q9NPC6 264 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 PGAP2Q9UHJ9 254 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 ZKSCAN5Q9Y2L8 839 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 LTBP3Q9NS15 1303 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 A0A1W2PRG0 241 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 SHTN1A0MZ66 631 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 MYO1BO43795 1136 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 RAD21O60216 631 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 TBC1D12O60347 775 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 NDUFB10O96000 172 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 PRPHP41219 470 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 E2F4Q16254 413 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 NBPF9Q3BBW0 867 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 CDAN1Q8IWY9 1227 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 TBCKQ8TEA7 893 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 RIC8AQ9NPQ8 531 aa20.12■□□□□ 0.81
LMNA-208ENST00000448611 BMP6P22004 513 aa20.11■□□□□ 0.81
LMNA-208ENST00000448611 RASSF7Q02833 373 aa20.11■□□□□ 0.81
LMNA-208ENST00000448611 LETM2Q2VYF4 491 aa20.11■□□□□ 0.81
LMNA-208ENST00000448611 DTHD1Q6ZMT9 781 aa20.11■□□□□ 0.81
LMNA-208ENST00000448611 MAN1B1Q9UKM7 699 aa20.11■□□□□ 0.81
LMNA-208ENST00000448611 CLCN1P35523 988 aa20.1■□□□□ 0.81
LMNA-208ENST00000448611 MMP14P50281 582 aa20.1■□□□□ 0.81
LMNA-208ENST00000448611 ZNF280AP59817 542 aaPredicted RBP20.1■□□□□ 0.81
LMNA-208ENST00000448611 NCAPHQ15003 741 aa20.1■□□□□ 0.81
LMNA-208ENST00000448611 QRICH1Q2TAL8 776 aa20.1■□□□□ 0.81
LMNA-208ENST00000448611 SMARCE1Q969G3 411 aa20.1■□□□□ 0.81
LMNA-208ENST00000448611 PAGE5Q96GU1 130 aa20.1■□□□□ 0.81
LMNA-208ENST00000448611 CCDC34Q96HJ3 373 aa20.1■□□□□ 0.81
LMNA-208ENST00000448611 CCNT1O60563 726 aaKnown RBP20.1■□□□□ 0.81
LMNA-208ENST00000448611 RPS12P25398 132 aaKnown RBP20.1■□□□□ 0.81
LMNA-208ENST00000448611 CLK2P49760 499 aaKnown RBP20.1■□□□□ 0.81
LMNA-208ENST00000448611 ORC2Q13416 577 aaPredicted RBP20.1■□□□□ 0.81
LMNA-208ENST00000448611 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.1■□□□□ 0.81
LMNA-208ENST00000448611 PYM1Q9BRP8 204 aaKnown RBP20.1■□□□□ 0.81
LMNA-208ENST00000448611 IKBKBO14920 756 aa20.09■□□□□ 0.81
LMNA-208ENST00000448611 MSNP26038 577 aaKnown RBP20.09■□□□□ 0.81
LMNA-208ENST00000448611 MORC3Q14149 939 aa20.09■□□□□ 0.81
LMNA-208ENST00000448611 TRIML1Q8N9V2 468 aa20.09■□□□□ 0.81
LMNA-208ENST00000448611 IQUBQ8NA54 791 aa20.09■□□□□ 0.81
LMNA-208ENST00000448611 NUP88Q99567 741 aaPredicted RBP20.09■□□□□ 0.81
LMNA-208ENST00000448611 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.09■□□□□ 0.81
LMNA-208ENST00000448611 EDIL3O43854 480 aa20.08■□□□□ 0.81
LMNA-208ENST00000448611 OR52Z1P0C646 297 aa20.08■□□□□ 0.81
LMNA-208ENST00000448611 MAP3K10Q02779 954 aa20.08■□□□□ 0.81
LMNA-208ENST00000448611 CDC37Q16543 378 aaPredicted RBP20.08■□□□□ 0.81
LMNA-208ENST00000448611 CUL5Q93034 780 aa20.08■□□□□ 0.81
LMNA-208ENST00000448611 ZBTB21Q9ULJ3 1066 aa20.08■□□□□ 0.81
LMNA-208ENST00000448611 SMTNL1A8MU46 457 aa20.08■□□□□ 0.8
LMNA-208ENST00000448611 NEMFO60524 1076 aa20.08■□□□□ 0.8
LMNA-208ENST00000448611 BMP3P12645 472 aa20.08■□□□□ 0.8
LMNA-208ENST00000448611 CDC25BP30305 580 aa20.08■□□□□ 0.8
LMNA-208ENST00000448611 ECE1P42892 770 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms