RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CYB5R4Q7L1T6 521 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 GCFC2P16383 781 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 LRCH2Q5VUJ6 765 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 ANKRD13AQ8IZ07 590 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 MYCT1Q8N699 235 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 NRBP2Q9NSY0 501 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 USP25Q9UHP3 1055 aa15.79■□□□□ 0.12
SMARCA4-204ENST00000444061 ZBTB5O15062 677 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 PLEKHA8P1O95397 391 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 CCDC172P0C7W6 258 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 XKR9Q5GH70 373 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 DYMQ7RTS9 669 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 FOXP1Q9H334 677 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 TRAF5O00463 557 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 EIF2AK2P19525 551 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 CETN2P41208 172 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 TRAPPC10P48553 1259 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 RAD51AP2Q09MP3 1159 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 ZSCAN23Q3MJ62 389 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 FNBP1Q96RU3 617 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 MTMR2Q13614 643 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 MB21D2Q8IYB1 491 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 FAM177A1Q8N128 213 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 ZNF280CQ8ND82 737 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 ZNF577Q9BSK1 485 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 DNAJC25Q9H1X3 360 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 FRMD4BQ9Y2L6 1034 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 RGPD8O14715 1765 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 C19orf81C9J6K1 198 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 IL1R1P14778 569 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 SNAPC2Q13487 334 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 TAF1CQ15572 869 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 PGBD1Q96JS3 809 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 ZDHHC15Q96MV8 337 aa15.78■□□□□ 0.12
SMARCA4-204ENST00000444061 WDR19Q8NEZ3 1342 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 HOXD10P28358 340 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 ZSCAN30Q86W11 494 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 TBCKQ8TEA7 893 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 NBPF3Q9H094 633 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 RNF146Q9NTX7 359 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 MTMR6Q9Y217 621 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 MYCP01106 439 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 SPDYE6P0CI01 402 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 AKT1S1Q96B36 256 aa15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 RPAP3Q9H6T3 665 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-204ENST00000444061 BRD1O95696 1058 aa15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 HOXA13P31271 388 aaPredicted RBP15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 USP28Q96RU2 1077 aa15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 CPVLQ9H3G5 476 aa15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 CWC15Q9P013 229 aaKnown RBP15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 PTGDRQ13258 359 aa15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 CEP135Q66GS9 1140 aa15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 FAM200AQ8TCP9 573 aa15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 TBC1D5Q92609 795 aa15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 ACBD3Q9H3P7 528 aa15.77■□□□□ 0.11
SMARCA4-204ENST00000444061 NEBLO76041 1014 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 AOPEPQ8N6M6 819 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 ATP6V0A1Q93050 837 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 WDR11Q9BZH6 1224 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 SUGCTQ9HAC7 445 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 TMOD1P28289 359 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 UBASH3AP57075 661 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 UBE2SQ16763 222 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 TMC6Q7Z403 805 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 GPC2Q8N158 579 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 DEPTORQ8TB45 409 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 ZNF202O95125 648 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 STAT3P40763 770 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 TAF3Q5VWG9 929 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 LPAR1Q92633 364 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 ZEB2O60315 1214 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 TYRO3Q06418 890 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 TAF4BQ92750 862 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 MTMR4Q9NYA4 1195 aa15.76■□□□□ 0.11
SMARCA4-204ENST00000444061 COPB2P35606 906 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 RCAN1P53805 252 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 CYP4A11Q02928 519 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 LRSAM1Q6UWE0 723 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 CTNND1O60716 968 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 BIRC3Q13489 604 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 GRM4Q14833 912 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 UPF1Q92900 1129 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 ABCC6O95255 1503 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 CHGBP05060 677 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 COG2Q14746 738 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 TRERF1Q96PN7 1200 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 ANO3Q9BYT9 981 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 EPB41P11171 864 aaKnown RBP15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 IGBP1P78318 339 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 C16orf86Q6ZW13 317 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 HACE1Q8IYU2 909 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 LY9Q9HBG7 655 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 NYAP2Q9P242 653 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 MYO6Q9UM54 1294 aa15.75■□□□□ 0.11
SMARCA4-204ENST00000444061 GPBP1Q86WP2 473 aa15.74■□□□□ 0.11
SMARCA4-204ENST00000444061 MRPL44Q9H9J2 332 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-204ENST00000444061 FAM205AQ6ZU69 1335 aa15.74■□□□□ 0.11
SMARCA4-204ENST00000444061 WDR46O15213 610 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms