RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 TBCKQ8TEA7 893 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 INO80Q9ULG1 1556 aaPredicted RBP24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 DIP2CQ9Y2E4 1556 aa24.82■■□□□ 1.56
CTDSPL-206ENST00000443503 CDC25BP30305 580 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 SLC16A2P36021 539 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 SRPRBQ9Y5M8 271 aaKnown RBP24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 GNA14O95837 355 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 ATP1A3P13637 1013 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 STRN3Q13033 797 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 RABL6Q3YEC7 729 aaPredicted RBP24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 CNKSR1Q969H4 720 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 IQCDQ96DY2 449 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 TUBGCP2Q9BSJ2 902 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 ASPRV1Q53RT3 343 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 KCTD1Q719H9 257 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 IQCGQ9H095 443 aaKnown RBP24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 SAMSN1Q9NSI8 373 aaKnown RBP24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 KIAA1024Q9UPX6 916 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 MIER3Q7Z3K6 550 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 PEX26Q7Z412 305 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 STMN4Q9H169 189 aaPredicted RBP24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 HAUS4Q9H6D7 363 aa24.81■■□□□ 1.56
CTDSPL-206ENST00000443503 PPP1R14CQ8TAE6 165 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 COA7Q96BR5 231 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 AMNQ9BXJ7 453 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 TNS3Q68CZ2 1445 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 NEDD4P46934 1319 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 CDHR2Q9BYE9 1310 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 CFAP221Q4G0U5 840 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 CPLX4Q7Z7G2 160 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 PLEKHA4Q9H4M7 779 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 TRIM28Q13263 835 aaKnown RBP24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 IFT20Q8IY31 132 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 ANKRD13CQ8N6S4 541 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 GINS2Q9Y248 185 aa24.8■■□□□ 1.56
CTDSPL-206ENST00000443503 TTLL1O95922 423 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 CHGBP05060 677 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 HPDP32754 393 aaPredicted RBP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 GRM1Q13255 1194 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 SND1Q7KZF4 910 aaKnown RBP eCLIP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 ATG9AQ7Z3C6 839 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 NLRX1Q86UT6 975 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 MB21D2Q8IYB1 491 aaPredicted RBP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 SLFN12Q8IYM2 578 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 GPR161Q8N6U8 529 aaKnown RBP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 MSANTD4Q8NCY6 345 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 LARP4BQ92615 738 aaKnown RBP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 CELF1Q92879 486 aaKnown RBP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 MINPP1Q9UNW1 487 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 CNOT6LQ96LI5 555 aaKnown RBP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 STAT1P42224 750 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 GRAPQ13588 217 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 GRAPLQ8TC17 118 aaPredicted RBP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 NSRP1Q9H0G5 558 aaKnown RBP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 TESPA1A2RU30 521 aaPredicted RBP24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 POLR2MP0CAP2 368 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 BCRP11274 1271 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 STAG1Q8WVM7 1258 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 PPP1R13BQ96KQ4 1090 aa24.79■■□□□ 1.56
CTDSPL-206ENST00000443503 LAD1O00515 517 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 CYP2D6P10635 497 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 ADAM9Q13443 819 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 MCTP2Q6DN12 878 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 THRAP3Q9Y2W1 955 aaKnown RBP24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 NOP56O00567 594 aaKnown RBP24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 RPS6KA4O75676 772 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 PLA2G4DQ86XP0 818 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 TRIM58Q8NG06 486 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 FAM178BQ8IXR5 827 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 ENOX1Q8TC92 643 aaKnown RBP24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 MRPL11Q9Y3B7 192 aaKnown RBP24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 CLRN2A0PK11 232 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 POLR2FP61218 127 aaKnown RBP24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 CLEC17AQ6ZS10 378 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 DAAM2Q86T65 1068 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 GJA10Q969M2 543 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 BRIP1Q9BX63 1249 aa24.78■■□□□ 1.56
CTDSPL-206ENST00000443503 PTPRUQ92729 1446 aa24.77■■□□□ 1.56
CTDSPL-206ENST00000443503 STOX1Q6ZVD7 989 aa24.77■■□□□ 1.56
CTDSPL-206ENST00000443503 AFAP1L1Q8TED9 768 aa24.77■■□□□ 1.56
CTDSPL-206ENST00000443503 CSRNP1Q96S65 589 aa24.77■■□□□ 1.56
CTDSPL-206ENST00000443503 CUEDC2Q9H467 287 aa24.77■■□□□ 1.56
CTDSPL-206ENST00000443503 UBL4BQ8N7F7 174 aa24.77■■□□□ 1.56
CTDSPL-206ENST00000443503 U2AF1L4Q8WU68 220 aaKnown RBP24.77■■□□□ 1.56
CTDSPL-206ENST00000443503 AK8Q96MA6 479 aa24.77■■□□□ 1.56
CTDSPL-206ENST00000443503 ABCB4P21439 1286 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 PABPC4Q13310 644 aaKnown RBP eCLIP24.76■■□□□ 1.554e-13■■■■■ 31.7
CTDSPL-206ENST00000443503 TNFAIP1Q13829 316 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 COL4A3BPQ9Y5P4 624 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 ACTN4O43707 911 aaKnown RBP24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 MAGEF1Q9HAY2 307 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 KCNK9Q9NPC2 374 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 FOSP01100 380 aaPredicted RBP24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 TRPC3Q13507 836 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 WHAMMP3Q1A5X7 153 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 GIMAP7Q8NHV1 300 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 GOLGA6BA6NDN3 693 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 PTPROQ16827 1216 aa24.76■■□□□ 1.55
CTDSPL-206ENST00000443503 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms