RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CCDC120Q96HB5 630 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 DSCC1Q9BVC3 393 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 SLC12A9Q9BXP2 914 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 NOL6Q9H6R4 1146 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 WHRNQ9P202 907 aa5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-204ENST00000438419 SSU72P8A0A1W2PR75 194 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 PPM1BO75688 479 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 SERINC3Q13530 473 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 TIGD5Q53EQ6 642 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 MRM1Q6IN84 353 aaKnown RBP5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 SPOCD1Q6ZMY3 1216 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 EEPD1Q7L9B9 569 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 PDZD8Q8NEN9 1154 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 ADCY4Q8NFM4 1077 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 PMFBP1Q8TBY8 1022 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 EPN3Q9H201 632 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 C19orf44Q9H6X5 657 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 ST7Q9NRC1 585 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 APEX2Q9UBZ4 518 aa5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 DIS3Q9Y2L1 958 aaKnown RBP5.65□□□□□ -1.51
TRAPPC13-204ENST00000438419 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 EFEMP2O95967 443 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 PPP2R5DQ14738 602 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 ADAT2Q7Z6V5 191 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 ARHGEF39Q8N4T4 335 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 TMEM52Q8NDY8 209 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 FAM168AQ92567 244 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 RCC1LQ96I51 464 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 KIRREL1Q96J84 757 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 MAP6Q96JE9 813 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 HHIPL1Q96JK4 782 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 APBA2Q99767 749 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 MCMBPQ9BTE3 642 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 AP5S1Q9NUS5 200 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 MSRB2Q9Y3D2 182 aa5.64□□□□□ -1.51
TRAPPC13-204ENST00000438419 ZNF503-AS2A6NEH8 195 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 SUSD5O60279 629 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 DUSP4Q13115 394 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 NR0B2Q15466 257 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 LRP10Q7Z4F1 713 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 ZSWIM9Q86XI8 627 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 MYLIPQ8WY64 445 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 MKL1Q969V6 931 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 ASIC4Q96FT7 647 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 ZDHHC15Q96MV8 337 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 FCRL3Q96P31 734 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 LGR4Q9BXB1 951 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 OSBPL2Q9H1P3 480 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 ERVK13-1Q9NX77 482 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 CGGBP1Q9UFW8 167 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 ZMYM5Q9UJ78 669 aa5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 SF3B6Q9Y3B4 125 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-204ENST00000438419 VAMP4O75379 141 aa5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 USP2O75604 605 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 GSTM1P09488 218 aa5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 IFNGR1P15260 489 aa5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 CWF19L1Q69YN2 538 aaKnown RBP5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 CRACR2BQ8N4Y2 399 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 ANKS4BQ8N8V4 417 aa5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 ST13P5Q8NFI4 369 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 ABHD4Q8TB40 342 aa5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 SHISA4Q96DD7 197 aa5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 FCRL2Q96LA5 508 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 CDADC1Q9BWV3 514 aa5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 CCDC113Q9H0I3 377 aa5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 SUGT1Q9Y2Z0 365 aa5.62□□□□□ -1.51
TRAPPC13-204ENST00000438419 FITM1A5D6W6 292 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 FADS2P1A8MWK0 482 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 AGRPO00253 132 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 PDPK1O15530 556 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 PSPNO60542 156 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 GLI1P08151 1106 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 RAC2P15153 192 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 ENDOUP21128 410 aaKnown RBP5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 KIR2DL1P43626 348 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 KIR2DL2P43627 348 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 RASGRF1Q13972 1273 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 NFE2L2Q16236 605 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 KCNMB1Q16558 191 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 POMZP3Q6PJE2 187 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 OXR1Q8N573 874 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 ZNF669Q96BR6 464 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 SYTL4Q96C24 671 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 RNF32Q9H0A6 362 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 EMC9Q9Y3B6 208 aa5.61□□□□□ -1.51
TRAPPC13-204ENST00000438419 FGF10O15520 208 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 IGSF3O75054 1194 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 CD3EP07766 207 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 NOP2P46087 812 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 POU4F1Q01851 419 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 CHRNEQ04844 493 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 GRB10Q13322 594 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 SLC10A6Q3KNW5 377 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 SV2CQ496J9 727 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 TMEM67Q5HYA8 995 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 SPPL2CQ8IUH8 684 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 BVESQ8NE79 360 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 LIN37Q96GY3 246 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms