RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 MTMR8Q96EF0 704 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 PLPPR2Q96GM1 343 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 CLUHP3Q96NS8 147 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 IPO9Q96P70 1041 aaKnown RBP6.36□□□□□ -1.39
LSM5-205ENST00000409952 CAMKK2Q96RR4 588 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 CDC6Q99741 560 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 CHST12Q9NRB3 414 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 SLC5A4Q9NY91 659 aa6.36□□□□□ -1.39
LSM5-205ENST00000409952 PHLDB1Q86UU1 1377 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 CCDC189A1A4V9 331 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 GOLGA6CA6NDK9 693 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 GOLGA6BA6NDN3 693 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 RNGTTO60942 597 aaKnown RBP6.35□□□□□ -1.39
LSM5-205ENST00000409952 GOLGA6DP0CG33 693 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 CDK8P49336 464 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 IRX6P78412 446 aaPredicted RBP6.35□□□□□ -1.39
LSM5-205ENST00000409952 MTMR1Q13613 665 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 ZRSR2Q15696 482 aaKnown RBP6.35□□□□□ -1.39
LSM5-205ENST00000409952 FAM209AQ5JX71 171 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 ZFYVE27Q5T4F4 411 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 RNF219Q5W0B1 726 aaPredicted RBP6.35□□□□□ -1.39
LSM5-205ENST00000409952 HDXQ7Z353 690 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 PASD1Q8IV76 773 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 TCEAL8Q8IYN2 117 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 AHI1Q8N157 1196 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 WDR66Q8TBY9 1149 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 LEO1Q8WVC0 666 aaPredicted RBP6.35□□□□□ -1.39
LSM5-205ENST00000409952 DDX1Q92499 740 aaKnown RBP6.35□□□□□ -1.39
LSM5-205ENST00000409952 CHMP4CQ96CF2 233 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 SMAD5Q99717 465 aaKnown RBP6.35□□□□□ -1.39
LSM5-205ENST00000409952 DUSP23Q9BVJ7 150 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 WNT10AQ9GZT5 417 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 LGR6Q9HBX8 967 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 GNL3LQ9NVN8 582 aaKnown RBP6.35□□□□□ -1.39
LSM5-205ENST00000409952 GOLGA6AQ9NYA3 693 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 GMIPQ9P107 970 aa6.35□□□□□ -1.39
LSM5-205ENST00000409952 TRBV23-1A0A0A0MS06 115 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 TRAV20A0A0B4J274 112 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 CYP26A1O43174 497 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 LEFTY1O75610 366 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 FAM87AP0C7U9 286 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 ACRP10323 421 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 NME1P15531 152 aaKnown RBP6.34□□□□□ -1.39
LSM5-205ENST00000409952 SDSP20132 328 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 SLC7A5Q01650 507 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 ITKQ08881 620 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 CYP27C1Q4G0S4 372 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 FAM102BQ5T8I3 360 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 OVOS1Q6IE37 1185 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 KSR2Q6VAB6 950 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 ZBTB46Q86UZ6 589 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.34□□□□□ -1.39
LSM5-205ENST00000409952 KCT2Q8NC54 265 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 SVIPQ8NHG7 77 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 ZNF507Q8TCN5 953 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 KLHL6Q8WZ60 621 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 HOOK2Q96ED9 719 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 ARPC5LQ9BPX5 153 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 MKNK2Q9HBH9 465 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 ARHGEF4Q9NR80 690 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 AASDHPPTQ9NRN7 309 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 ZC3H7BQ9UGR2 993 aaKnown RBP6.34□□□□□ -1.39
LSM5-205ENST00000409952 PCDHB10Q9UN67 800 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 CSADQ9Y600 493 aa6.34□□□□□ -1.39
LSM5-205ENST00000409952 GPR39O43194 453 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 NPTXRO95502 500 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 NAT2P11245 290 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 STRN3Q13033 797 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 SLBPQ14493 270 aaKnown RBP eCLIP6.33□□□□□ -1.4
LSM5-205ENST00000409952 MLC1Q15049 377 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 DHCR24Q15392 516 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
LSM5-205ENST00000409952 SLC4A10Q6U841 1118 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 NLRC3Q7RTR2 1065 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 SCUBE1Q8IWY4 988 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 FBXO41Q8TF61 875 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 ELMO3Q96BJ8 720 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 ATG4CQ96DT6 458 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 SCYL1Q96KG9 808 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 RTFDC1Q9BY42 306 aaPredicted RBP6.33□□□□□ -1.4
LSM5-205ENST00000409952 PUS7LQ9H0K6 701 aaKnown RBP6.33□□□□□ -1.4
LSM5-205ENST00000409952 SFMBT1Q9UHJ3 866 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 PNMA2Q9UL42 364 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 U3KQE9 123 aa6.33□□□□□ -1.4
LSM5-205ENST00000409952 A0A1W2PQU0 124 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 TNFRSF10CO14798 259 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 BRINP1O60477 761 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 WDHD1O75717 1129 aaPredicted RBP6.32□□□□□ -1.4
LSM5-205ENST00000409952 LRIG2O94898 1065 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 ZNF143P52747 638 aaPredicted RBP6.32□□□□□ -1.4
LSM5-205ENST00000409952 HSP90AA2PQ14568 343 aaPredicted RBP6.32□□□□□ -1.4
LSM5-205ENST00000409952 STAT4Q14765 748 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 GFOD2Q3B7J2 385 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 GNPTABQ3T906 1256 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 LHFPL2Q6ZUX7 228 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 SPATS2Q86XZ4 545 aaKnown RBP6.32□□□□□ -1.4
LSM5-205ENST00000409952 WFDC3Q8IUB2 231 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 MAGEB6Q8N7X4 407 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 SLC9A7Q96T83 725 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms