RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 MCMBPQ9BTE3 642 aa7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 WHRNQ9P202 907 aa7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 PRKAG3Q9UGI9 489 aa7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 MRVI1Q9Y6F6 885 aa7.29□□□□□ -1.24
HMGB1P13-201ENST00000406019 NRDCO43847 1150 aa7.28□□□□□ -1.24
HMGB1P13-201ENST00000406019 PSPNO60542 156 aa7.28□□□□□ -1.24
HMGB1P13-201ENST00000406019 PRR23BQ6ZRT6 265 aa7.28□□□□□ -1.24
HMGB1P13-201ENST00000406019 SLCO6A1Q86UG4 719 aa7.28□□□□□ -1.24
HMGB1P13-201ENST00000406019 OXR1Q8N573 874 aa7.28□□□□□ -1.24
HMGB1P13-201ENST00000406019 ZNF408Q9H9D4 720 aa7.28□□□□□ -1.24
HMGB1P13-201ENST00000406019 AP5S1Q9NUS5 200 aa7.28□□□□□ -1.24
HMGB1P13-201ENST00000406019 ITGA4P13612 1032 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 NCLP19338 710 aaKnown RBP7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 PPP2R5EQ16537 467 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 SDE2Q6IQ49 451 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 VHLLQ6RSH7 139 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 ZNF662Q6ZS27 426 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 CKAP2LQ8IYA6 745 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 NLGN1Q8N2Q7 840 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 ARHGEF39Q8N4T4 335 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 MKL1Q969V6 931 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 FCRL3Q96P31 734 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 PLCD4Q9BRC7 762 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 DSCC1Q9BVC3 393 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 NOL6Q9H6R4 1146 aaKnown RBP7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 GOLGA2P5Q9HBQ8 144 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 APEX2Q9UBZ4 518 aa7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 YBX2Q9Y2T7 364 aaKnown RBP7.27□□□□□ -1.25
HMGB1P13-201ENST00000406019 FGF10O15520 208 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 SSBP05455 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 CDK11BP21127 795 aaKnown RBP7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 SNX17Q15036 470 aa7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 EGFLAMQ63HQ2 1017 aa7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 MRM1Q6IN84 353 aaKnown RBP7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 KIAA1211LQ6NV74 962 aa7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 SPPL2CQ8IUH8 684 aa7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 MICAL1Q8TDZ2 1067 aa7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 RCC1LQ96I51 464 aaKnown RBP7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 FAM53CQ9NYF3 392 aa7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 TNFRSF10DQ9UBN6 386 aa7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 CGGBP1Q9UFW8 167 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 CDK11AQ9UQ88 783 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 GPR55Q9Y2T6 319 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P13-201ENST00000406019 ANKRD62A6NC57 917 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 LRRC10BA6NIK2 292 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 B2RBV5 119 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 KRT1P04264 644 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 IFNGR1P15260 489 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 ENDOUP21128 410 aaKnown RBP7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 BMS1Q14692 1282 aaKnown RBP7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 KIR3DS1Q14943 382 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 NFE2L2Q16236 605 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 MLANAQ16655 118 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 TNNI3KQ59H18 835 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 ZNF648Q5T619 568 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 HEATR6Q6AI08 1181 aaKnown RBP7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 JAZF1Q86VZ6 243 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 CILP2Q8IUL8 1156 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 ADCY4Q8NFM4 1077 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 FGD4Q96M96 766 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 CWC22Q9HCG8 908 aaKnown RBP7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 ACTR10Q9NZ32 417 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 ZMYM5Q9UJ78 669 aa7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 DIS3Q9Y2L1 958 aaKnown RBP7.25□□□□□ -1.25
HMGB1P13-201ENST00000406019 KLF4O43474 513 aa7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 C8AP07357 584 aa7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 GALK1P51570 392 aa7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 TCEAL1Q15170 157 aa7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 HSF5Q4G112 596 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 NOL9Q5SY16 702 aaKnown RBP7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 C6orf15Q6UXA7 325 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 IRF2BP1Q8IU81 584 aa7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 INTS4Q96HW7 963 aaKnown RBP7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 ZDHHC15Q96MV8 337 aa7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 CDADC1Q9BWV3 514 aa7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 GBP3Q9H0R5 595 aa7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 KCNK12Q9HB15 430 aa7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 SF3B6Q9Y3B4 125 aaKnown RBP7.24□□□□□ -1.25
HMGB1P13-201ENST00000406019 SBNO2Q9Y2G9 1366 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 SSU72P8A0A1W2PR75 194 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 ANKRD34BA5PLL1 514 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 PPM1GO15355 546 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 CAPNS1P04632 268 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 GSTM1P09488 218 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 ZNF143P52747 638 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 CYP4F3Q08477 520 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 GRB10Q13322 594 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 NCAPHQ15003 741 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 CEP128Q6ZU80 1094 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 JMJD8Q96S16 334 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 GPR160Q9UJ42 338 aa7.23□□□□□ -1.25
HMGB1P13-201ENST00000406019 AURKAO14965 403 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 RTP1P59025 263 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 RAB33AQ14088 237 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 PPP2R5DQ14738 602 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 RCSD1Q6JBY9 416 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 ANKS3Q6ZW76 656 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 FAM178BQ8IXR5 827 aa7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 SYTL4Q96C24 671 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P13-201ENST00000406019 MRGPRX3Q96LB0 322 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms