RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 LARP6Q9BRS8 491 aaKnown RBP20.36■□□□□ 0.85
TNFSF13-205ENST00000396545 FBXO28Q9NVF7 368 aa20.36■□□□□ 0.85
TNFSF13-205ENST00000396545 TPCN1Q9ULQ1 816 aa20.36■□□□□ 0.85
TNFSF13-205ENST00000396545 SEPT4O43236 478 aa20.35■□□□□ 0.85
TNFSF13-205ENST00000396545 SLC25A27O95847 323 aa20.35■□□□□ 0.85
TNFSF13-205ENST00000396545 SKOR2Q2VWA4 1001 aaPredicted RBP20.35■□□□□ 0.85
TNFSF13-205ENST00000396545 STOX1Q6ZVD7 989 aa20.35■□□□□ 0.85
TNFSF13-205ENST00000396545 GOPCQ9HD26 462 aa20.35■□□□□ 0.85
TNFSF13-205ENST00000396545 COL11A1P12107 1806 aaPredicted RBP20.35■□□□□ 0.85
TNFSF13-205ENST00000396545 FCER1AP12319 257 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 ATN1P54259 1190 aaPredicted RBP20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 SBK1Q52WX2 424 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 SAMD1Q6SPF0 538 aaPredicted RBP20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 IFNL3Q8IZI9 196 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 MAML3Q96JK9 1138 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 NAPBQ9H115 298 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 ROBO3Q96MS0 1386 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 GSG1L2A8MUP6 293 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 VWA5AO00534 786 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 MDM2Q00987 491 aaPredicted RBP20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 GJC2Q5T442 439 aaPredicted RBP20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 RIOX2Q8IUF8 465 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 ARRDC4Q8NCT1 418 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 PPP1R9AQ9ULJ8 1098 aa20.34■□□□□ 0.85
TNFSF13-205ENST00000396545 RASA1P20936 1047 aa20.33■□□□□ 0.84
TNFSF13-205ENST00000396545 FAM83BQ5T0W9 1011 aa20.33■□□□□ 0.84
TNFSF13-205ENST00000396545 ANO1Q5XXA6 986 aa20.33■□□□□ 0.84
TNFSF13-205ENST00000396545 CCDC83Q8IWF9 413 aa20.33■□□□□ 0.84
TNFSF13-205ENST00000396545 REPS2Q8NFH8 660 aa20.33■□□□□ 0.84
TNFSF13-205ENST00000396545 ZNF214Q9UL59 606 aaPredicted RBP20.33■□□□□ 0.84
TNFSF13-205ENST00000396545 LAMA4Q16363 1823 aa20.33■□□□□ 0.84
TNFSF13-205ENST00000396545 E7EWF7 191 aa20.32■□□□□ 0.84
TNFSF13-205ENST00000396545 PRAMEF19Q5SWL8 479 aa20.32■□□□□ 0.84
TNFSF13-205ENST00000396545 DHX32Q7L7V1 743 aaKnown RBP20.32■□□□□ 0.84
TNFSF13-205ENST00000396545 SMC3Q9UQE7 1217 aa20.32■□□□□ 0.84
TNFSF13-205ENST00000396545 ZNFX1Q9P2E3 1918 aaKnown RBP20.32■□□□□ 0.84
TNFSF13-205ENST00000396545 KBTBD13C9JR72 458 aa20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 STAT3P40763 770 aa20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 RTP1P59025 263 aa20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 DEFB123Q8N688 67 aa20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 TCEANC2Q96MN5 208 aa20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 MMP19Q99542 508 aa20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 AGXT2Q9BYV1 514 aa20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 EPB41L4AQ9HCS5 686 aaPredicted RBP20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 NRBP1Q9UHY1 535 aa20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 WDR19Q8NEZ3 1342 aa20.31■□□□□ 0.84
TNFSF13-205ENST00000396545 PCP11498 1178 aaKnown RBP20.3■□□□□ 0.84
TNFSF13-205ENST00000396545 TDO2P48775 406 aa20.3■□□□□ 0.84
TNFSF13-205ENST00000396545 EXOSC10Q01780 885 aaKnown RBP20.3■□□□□ 0.84
TNFSF13-205ENST00000396545 TRDNQ13061 729 aa20.3■□□□□ 0.84
TNFSF13-205ENST00000396545 MCTP1Q6DN14 999 aa20.3■□□□□ 0.84
TNFSF13-205ENST00000396545 FBXL16Q8N461 479 aa20.3■□□□□ 0.84
TNFSF13-205ENST00000396545 NCOA7Q8NI08 942 aa20.3■□□□□ 0.84
TNFSF13-205ENST00000396545 NYAP2Q9P242 653 aa20.3■□□□□ 0.84
TNFSF13-205ENST00000396545 RAD21O60216 631 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 PGK2P07205 417 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 COPB2P35606 906 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 KCTD2Q14681 263 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 SNX17Q15036 470 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 ZNF792Q3KQV3 632 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 FAM47AQ5JRC9 791 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 Q7L0L9 218 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 NUP88Q99567 741 aaPredicted RBP20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 LBHD1Q9BQE6 289 aaPredicted RBP20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 LMBRD1Q9NUN5 540 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 DIS3Q9Y2L1 958 aaKnown RBP20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 LTBP2Q14767 1821 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 MINDY4BA8MYZ0 360 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 NT5C2P49902 561 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 LRRC41Q15345 812 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 SLC39A5Q6ZMH5 540 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 RALYLQ86SE5 291 aaKnown RBP20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 SLF1Q9BQI6 1058 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 TINF2Q9BSI4 451 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 RNF41Q9H4P4 317 aaPredicted RBP20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 CNNM2Q9H8M5 875 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 MKNK2Q9HBH9 465 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 ANAPC4Q9UJX5 808 aa20.29■□□□□ 0.84
TNFSF13-205ENST00000396545 PLXNA1Q9UIW2 1896 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 IGKV6D-41A0A0C4DH26 115 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 F5H6K3 240 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 NDUFB10O96000 172 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 PDIA4P13667 645 aaKnown RBP20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 GJB2P29033 226 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 KLRC3Q07444 240 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 Q6ZUG5 572 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 STK11IPQ8N1F8 1099 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 NECAB1Q8N987 351 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 PRKAG2Q9UGJ0 569 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 ATP11BQ9Y2G3 1177 aa20.28■□□□□ 0.84
TNFSF13-205ENST00000396545 CUL9Q8IWT3 2517 aa20.27■□□□□ 0.84
TNFSF13-205ENST00000396545 SYT1P21579 422 aa20.27■□□□□ 0.84
TNFSF13-205ENST00000396545 MCM5P33992 734 aa20.27■□□□□ 0.84
TNFSF13-205ENST00000396545 KLHL40Q2TBA0 621 aa20.27■□□□□ 0.84
TNFSF13-205ENST00000396545 CHMP4CQ96CF2 233 aa20.27■□□□□ 0.84
TNFSF13-205ENST00000396545 TEX13BQ9BXU2 312 aa20.27■□□□□ 0.84
TNFSF13-205ENST00000396545 SMCHD1A6NHR9 2005 aa20.27■□□□□ 0.83
TNFSF13-205ENST00000396545 STX6O43752 255 aa20.26■□□□□ 0.83
TNFSF13-205ENST00000396545 MYCNP04198 464 aaPredicted RBP20.26■□□□□ 0.83
TNFSF13-205ENST00000396545 ADCYAP1R1P41586 468 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms