RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 TRIM60Q495X7 471 aa13.12□□□□□ -0.31
CNIH1-202ENST00000395573 Q7L0L9 218 aa13.12□□□□□ -0.31
CNIH1-202ENST00000395573 GMCL1P1Q8NEA9 526 aa13.12□□□□□ -0.31
CNIH1-202ENST00000395573 MKL1Q969V6 931 aa13.12□□□□□ -0.31
CNIH1-202ENST00000395573 FEM1BQ9UK73 627 aa13.12□□□□□ -0.31
CNIH1-202ENST00000395573 SYNPO2Q9UMS6 1093 aa13.12□□□□□ -0.31
CNIH1-202ENST00000395573 RIPK3Q9Y572 518 aa13.12□□□□□ -0.31
CNIH1-202ENST00000395573 PRUNE2Q8WUY3 3088 aa13.12□□□□□ -0.31
CNIH1-202ENST00000395573 MYO9BQ13459 2157 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 ATP2A1O14983 1001 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 PGK1P00558 417 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 ZNF865P0CJ78 1059 aaPredicted RBP13.11□□□□□ -0.31
CNIH1-202ENST00000395573 BMP3P12645 472 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 AKR1A1P14550 325 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 TFAP4Q01664 338 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 SNX17Q15036 470 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 SLFN13Q68D06 897 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 RNF180Q86T96 592 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 NEDD1Q8NHV4 660 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 LENG1Q96BZ8 264 aaPredicted RBP13.11□□□□□ -0.31
CNIH1-202ENST00000395573 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 RAVER2Q9HCJ3 691 aaKnown RBP13.11□□□□□ -0.31
CNIH1-202ENST00000395573 CDH23Q9H251 3354 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 KIAA1217Q5T5P2 1943 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 SYNGAP1Q96PV0 1343 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 SALL3Q9BXA9 1300 aa13.11□□□□□ -0.31
CNIH1-202ENST00000395573 MYH7BA7E2Y1 1941 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 DNAJC25-GNG10A0A024R161 153 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 IKQ13123 557 aaPredicted RBP13.1□□□□□ -0.31
CNIH1-202ENST00000395573 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 CCDC129Q6ZRS4 1044 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 ANKRD35Q8N283 1001 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 MSL3Q8N5Y2 521 aaKnown RBP13.1□□□□□ -0.31
CNIH1-202ENST00000395573 RNF25Q96BH1 459 aaPredicted RBP13.1□□□□□ -0.31
CNIH1-202ENST00000395573 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 CRBNQ96SW2 442 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 PDLIM7Q9NR12 457 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
CNIH1-202ENST00000395573 PHF24Q9UPV7 400 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 CUL9Q8IWT3 2517 aa13.1□□□□□ -0.31
CNIH1-202ENST00000395573 A0A1W2PQ45 241 aaPredicted RBP13.09□□□□□ -0.31
CNIH1-202ENST00000395573 A0A1W2PQY0 241 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 TMEM232C9JQI7 657 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 STAT2P52630 851 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 C1orf53Q5VUE5 145 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 MAMDC4Q6UXC1 1216 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 SLC17A8Q8NDX2 589 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 CHST13Q8NET6 341 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 HOMER2Q9NSB8 354 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 FBXO40Q9UH90 709 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 FAM184BQ9ULE4 1060 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 SYNRGQ9UMZ2 1314 aa13.09□□□□□ -0.31
CNIH1-202ENST00000395573 TSPY2A6NKD2 308 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 FOXP2O15409 715 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 SNAI1O95863 264 aaPredicted RBP13.08□□□□□ -0.32
CNIH1-202ENST00000395573 FDX1P10109 184 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 SLC1A4P43007 532 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 OAZ1P54368 228 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 TLE2Q04725 743 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.08□□□□□ -0.32
CNIH1-202ENST00000395573 SH3RF1Q7Z6J0 888 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 BADQ92934 168 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 EVI5LQ96CN4 794 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 STX8Q9UNK0 236 aa13.08□□□□□ -0.32
CNIH1-202ENST00000395573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.08□□□□□ -0.32
CNIH1-202ENST00000395573 TRIM43BA6NCK2 446 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
CNIH1-202ENST00000395573 PQBP1O60828 265 aaKnown RBP13.07□□□□□ -0.32
CNIH1-202ENST00000395573 ADAMTS4O75173 837 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 CLTBP09497 229 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 MCCP23508 829 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 PDE1AP54750 535 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 ACVR2BQ13705 512 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 VPS53Q5VIR6 699 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 STAG1Q8WVM7 1258 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 TRIM43Q96BQ3 446 aaPredicted RBP13.07□□□□□ -0.32
CNIH1-202ENST00000395573 GMCL1Q96IK5 515 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 TSEN34Q9BSV6 310 aaKnown RBP13.07□□□□□ -0.32
CNIH1-202ENST00000395573 ACAD9Q9H845 621 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 INCENPQ9NQS7 918 aa13.07□□□□□ -0.32
CNIH1-202ENST00000395573 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.07□□□□□ -0.32
CNIH1-202ENST00000395573 NMT2O60551 498 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 DUSP11O75319 330 aaKnown RBP13.06□□□□□ -0.32
CNIH1-202ENST00000395573 ACLYP53396 1101 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
CNIH1-202ENST00000395573 SHHQ15465 462 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 ARMCX2Q7L311 632 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 FGD4Q96M96 766 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 AGBL1Q96MI9 1066 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 ABHD16BQ9H3Z7 469 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 STARD7Q9NQZ5 370 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 IL17RBQ9NRM6 502 aa13.06□□□□□ -0.32
CNIH1-202ENST00000395573 HELLSQ9NRZ9 838 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms