RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 FOXO4P98177 505 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 EZH2Q15910 746 aaKnown RBP24.27■■□□□ 1.48
CLDND1-202ENST00000394180 CAGE1Q8TC20 777 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 PURBQ96QR8 312 aaKnown RBP24.27■■□□□ 1.48
CLDND1-202ENST00000394180 ALG1Q9BT22 464 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 HMGB1P1B2RPK0 211 aaPredicted RBP24.27■■□□□ 1.48
CLDND1-202ENST00000394180 FOXN1O15353 648 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 ACTN4O43707 911 aaKnown RBP24.27■■□□□ 1.48
CLDND1-202ENST00000394180 MGRN1O60291 552 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 PCCAP05165 728 aaPredicted RBP24.27■■□□□ 1.48
CLDND1-202ENST00000394180 MDH1P40925 334 aaKnown RBP24.27■■□□□ 1.48
CLDND1-202ENST00000394180 INHBEP58166 350 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 KLHDC4Q8TBB5 520 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 ARL8AQ96BM9 186 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 ZNF652Q9Y2D9 606 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 UBR3Q6ZT12 1888 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 RWDD2BP57060 319 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 TBC1D9BQ66K14 1250 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 LMBR1LQ6UX01 489 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 CLEC4GQ6UXB4 293 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 MB21D2Q8IYB1 491 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-202ENST00000394180 GSDMAQ96QA5 445 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 DNAJC8O75937 253 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-202ENST00000394180 MYH8P13535 1937 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 FAM228AQ86W67 206 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 IQCKQ8N0W5 287 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 CCHCR1Q8TD31 782 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 DNAJC7Q99615 494 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 SERTAD1Q9UHV2 236 aa24.26■■□□□ 1.47
CLDND1-202ENST00000394180 CCDC122Q5T0U0 273 aa24.25■■□□□ 1.47
CLDND1-202ENST00000394180 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-202ENST00000394180 OR8K1Q8NGG5 319 aa24.25■■□□□ 1.47
CLDND1-202ENST00000394180 FAM210AQ96ND0 272 aa24.25■■□□□ 1.47
CLDND1-202ENST00000394180 NUP88Q99567 741 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-202ENST00000394180 ETAA1Q9NY74 926 aa24.25■■□□□ 1.47
CLDND1-202ENST00000394180 TPX2Q9ULW0 747 aaKnown RBP24.25■■□□□ 1.47
CLDND1-202ENST00000394180 PPFIA3O75145 1194 aa24.25■■□□□ 1.47
CLDND1-202ENST00000394180 KRT9P35527 623 aa24.25■■□□□ 1.47
CLDND1-202ENST00000394180 RABL6Q3YEC7 729 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-202ENST00000394180 SAMD1Q6SPF0 538 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-202ENST00000394180 CEP57Q86XR8 500 aa24.25■■□□□ 1.47
CLDND1-202ENST00000394180 CCDC85AQ96PX6 553 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-202ENST00000394180 TSGA10Q9BZW7 698 aa24.25■■□□□ 1.47
CLDND1-202ENST00000394180 FBXO2Q9UK22 296 aaPredicted RBP24.25■■□□□ 1.47
CLDND1-202ENST00000394180 PRC1O43663 620 aa24.24■■□□□ 1.47
CLDND1-202ENST00000394180 CDCA2Q69YH5 1023 aaPredicted RBP24.24■■□□□ 1.47
CLDND1-202ENST00000394180 DEFB132Q7Z7B7 95 aa24.24■■□□□ 1.47
CLDND1-202ENST00000394180 RNPC3Q96LT9 517 aaKnown RBP24.24■■□□□ 1.47
CLDND1-202ENST00000394180 HDAC6Q9UBN7 1215 aa24.24■■□□□ 1.47
CLDND1-202ENST00000394180 SCN7AQ01118 1682 aa24.24■■□□□ 1.47
CLDND1-202ENST00000394180 STK36Q9NRP7 1315 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 LIN7AO14910 233 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-202ENST00000394180 NR1D1P20393 614 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 GBP2P32456 591 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-202ENST00000394180 RIPK1Q13546 671 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 TRIM29Q14134 588 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.23■■□□□ 1.47
CLDND1-202ENST00000394180 GDAP1L1Q96MZ0 367 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 EBF2Q9HAK2 575 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 TFCP2L1Q9NZI6 479 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 POLR2DO15514 142 aaKnown RBP24.23■■□□□ 1.47
CLDND1-202ENST00000394180 IFT88Q13099 833 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 IMMTQ16891 758 aaKnown RBP24.23■■□□□ 1.47
CLDND1-202ENST00000394180 GSPT2Q8IYD1 628 aaKnown RBP24.23■■□□□ 1.47
CLDND1-202ENST00000394180 CCDC170Q8IYT3 715 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 CAMKK2Q96RR4 588 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 STIM2Q9P246 746 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 CEP131Q9UPN4 1083 aa24.23■■□□□ 1.47
CLDND1-202ENST00000394180 A0A1W2PQC6 194 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 CCNHP51946 323 aaPredicted RBP24.22■■□□□ 1.47
CLDND1-202ENST00000394180 SH3RF1Q7Z6J0 888 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 STK11IPQ8N1F8 1099 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 NCOA7Q8NI08 942 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 GPR108Q9NPR9 543 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 C5orf60A6NFR6 353 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 IRS4O14654 1257 aaPredicted RBP24.22■■□□□ 1.47
CLDND1-202ENST00000394180 CYLC1P35663 651 aaPredicted RBP24.22■■□□□ 1.47
CLDND1-202ENST00000394180 CCDC155Q8N6L0 562 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 CCDC47Q96A33 483 aaKnown RBP24.22■■□□□ 1.47
CLDND1-202ENST00000394180 AKT1S1Q96B36 256 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 ZIM3Q96PE6 472 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 SLC24A3Q9HC58 644 aa24.22■■□□□ 1.47
CLDND1-202ENST00000394180 SRPRBQ9Y5M8 271 aaKnown RBP24.22■■□□□ 1.47
CLDND1-202ENST00000394180 MYO5AQ9Y4I1 1855 aaKnown RBP24.21■■□□□ 1.47
CLDND1-202ENST00000394180 PDE2AO00408 941 aaPredicted RBP24.21■■□□□ 1.47
CLDND1-202ENST00000394180 ENC1O14682 589 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 N4BP3O15049 544 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 ZMYND10O75800 440 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 VAV2P52735 878 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 RBBP5Q15291 538 aaKnown RBP24.21■■□□□ 1.47
CLDND1-202ENST00000394180 MEA1Q16626 185 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 TSR1Q2NL82 804 aaKnown RBP24.21■■□□□ 1.47
CLDND1-202ENST00000394180 ANKRD20A8PQ5CZ79 823 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 RILPL1Q5EBL4 403 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 SPECC1Q5M775 1068 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 ITFG2Q969R8 447 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 CENPHQ9H3R5 247 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 PAG1Q9NWQ8 432 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 SNX12Q9UMY4 172 aa24.21■■□□□ 1.47
CLDND1-202ENST00000394180 NTSR2O95665 410 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms