RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 HYOU1Q9Y4L1 999 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 INPP5BP32019 993 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 ATP1A2P50993 1020 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 SRGAP1Q7Z6B7 1085 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 VSTM4Q8IW00 320 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 IFT74Q96LB3 600 aa18.94■□□□□ 0.62
SGCB-201ENST00000381431 SRPRBQ9Y5M8 271 aaKnown RBP18.94■□□□□ 0.62
SGCB-201ENST00000381431 TRAPPC10P48553 1259 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 RUFY4Q6ZNE9 571 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 CABS1Q96KC9 395 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 ARHGAP31Q2M1Z3 1444 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 ATP2B4P23634 1241 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 SLC16A2P36021 539 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 EHHADHQ08426 723 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 DLGAP5Q15398 846 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 B4GALNT4Q76KP1 1039 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 SPICE1Q8N0Z3 855 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 TBCKQ8TEA7 893 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 IL25Q9H293 177 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 COMMD10Q9Y6G5 202 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 ANKARQ7Z5J8 1434 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 BCRP11274 1271 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 SCARF1Q14162 830 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 CERKLQ49MI3 558 aaPredicted RBP18.93■□□□□ 0.62
SGCB-201ENST00000381431 SLFN13Q68D06 897 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 GALNT17Q6IS24 598 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 COA7Q96BR5 231 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 TSKSQ9UJT2 592 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 HECW2Q9P2P5 1572 aa18.93■□□□□ 0.62
SGCB-201ENST00000381431 USP17L3A6NCW0 530 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 USP17L4A6NCW7 530 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 CYP27A1Q02318 531 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 RASSF7Q02833 373 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 PABPC4Q13310 644 aaKnown RBP eCLIP18.92■□□□□ 0.62
SGCB-201ENST00000381431 CCDC144BQ3MJ40 725 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 USP17L1Q7RTZ2 530 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 SPTLC3Q9NUV7 552 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 PCDHA4Q9UN74 947 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 TCP1P17987 556 aaKnown RBP18.92■□□□□ 0.62
SGCB-201ENST00000381431 ICA1Q05084 483 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 NAA35Q5VZE5 725 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 CYB5R4Q7L1T6 521 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 THRAP3Q9Y2W1 955 aaKnown RBP18.92■□□□□ 0.62
SGCB-201ENST00000381431 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 KDM3AQ9Y4C1 1321 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 DCAF8L1A6NGE4 600 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 PPIP5K2O43314 1243 aa18.92■□□□□ 0.62
SGCB-201ENST00000381431 LARP4BQ92615 738 aaKnown RBP18.92■□□□□ 0.62
SGCB-201ENST00000381431 PPANQ9NQ55 473 aaKnown RBP18.92■□□□□ 0.62
SGCB-201ENST00000381431 CEP85LQ5SZL2 805 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 FAM178BQ8IXR5 827 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 PIGSQ96S52 555 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 AGTPBP1Q9UPW5 1226 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 LONRF2Q1L5Z9 754 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 STOX1Q6ZVD7 989 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 FBXO11Q86XK2 927 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 AMFRQ9UKV5 643 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 TMEM232C9JQI7 657 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
SGCB-201ENST00000381431 GNA14O95837 355 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 CD19P15391 556 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 VPS41P49754 854 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 UHMK1Q8TAS1 419 aaKnown RBP18.91■□□□□ 0.62
SGCB-201ENST00000381431 CCDC127Q96BQ5 260 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 DPH5Q9H2P9 285 aa18.91■□□□□ 0.62
SGCB-201ENST00000381431 H2AFZP0C0S5 128 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 FAM196AQ6ZSG2 479 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 H2AFVQ71UI9 128 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 P2RX5Q93086 422 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
SGCB-201ENST00000381431 RNF17Q9BXT8 1623 aaKnown RBP18.9■□□□□ 0.62
SGCB-201ENST00000381431 KRIT1O00522 736 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 KCTD1Q719H9 257 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 FMR1NBQ8N0W7 255 aaPredicted RBP18.9■□□□□ 0.62
SGCB-201ENST00000381431 SMCR8Q8TEV9 937 aaPredicted RBP18.9■□□□□ 0.62
SGCB-201ENST00000381431 PAGE5Q96GU1 130 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 TSNARE1Q96NA8 513 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 CPVLQ9H3G5 476 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 EXOC7Q9UPT5 735 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 STAMBPO95630 424 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 CXCR5P32302 372 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 SYCE1Q8N0S2 351 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 PICK1Q9NRD5 415 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 MED14O60244 1454 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 PTPREP23469 700 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 MECOMQ03112 1051 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 STRN3Q13033 797 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 DCUN1D2Q6PH85 259 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 GDAQ9Y2T3 454 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 GLI2P10070 1586 aa18.9■□□□□ 0.62
SGCB-201ENST00000381431 NBPF26B4DH59 902 aa18.89■□□□□ 0.62
SGCB-201ENST00000381431 E7EVH7 732 aa18.89■□□□□ 0.62
SGCB-201ENST00000381431 PRPF3O43395 683 aaKnown RBP18.89■□□□□ 0.62
SGCB-201ENST00000381431 ALAS1P13196 640 aa18.89■□□□□ 0.62
SGCB-201ENST00000381431 NBPF10Q6P3W6 841 aaKnown RBP18.89■□□□□ 0.62
SGCB-201ENST00000381431 NBPF15Q8N660 670 aa18.89■□□□□ 0.62
SGCB-201ENST00000381431 IQCDQ96DY2 449 aa18.89■□□□□ 0.62
SGCB-201ENST00000381431 GPR101Q96P66 508 aaPredicted RBP18.89■□□□□ 0.62
SGCB-201ENST00000381431 TNNI1P19237 187 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms