RNA–Protein interactions for RNA: ENST00000373544.5

RABEPK-203, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-203ENST00000373544 FAM151AQ8WW52 585 aa13.79□□□□□ -0.2
RABEPK-203ENST00000373544 MYOZ2Q9NPC6 264 aa13.79□□□□□ -0.2
RABEPK-203ENST00000373544 TRAPPC10P48553 1259 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 IKQ13123 557 aaPredicted RBP13.78□□□□□ -0.2
RABEPK-203ENST00000373544 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
RABEPK-203ENST00000373544 C4orf32Q8N8J7 132 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 DAGLBQ8NCG7 672 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 AGBL3Q8NEM8 1001 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
RABEPK-203ENST00000373544 NYAP2Q9P242 653 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 GOLGA6L19H0YKK7 550 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 ACTN4O43707 911 aaKnown RBP13.78□□□□□ -0.2
RABEPK-203ENST00000373544 CCNT1O60563 726 aaKnown RBP13.78□□□□□ -0.2
RABEPK-203ENST00000373544 NDUFB10O96000 172 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 REXO1Q8N1G1 1221 aaKnown RBP13.78□□□□□ -0.2
RABEPK-203ENST00000373544 TBCKQ8TEA7 893 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 CCDC12Q8WUD4 166 aaPredicted RBP13.78□□□□□ -0.2
RABEPK-203ENST00000373544 FERMT2Q96AC1 680 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 UIMC1Q96RL1 719 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 TRIM5Q9C035 493 aa13.78□□□□□ -0.2
RABEPK-203ENST00000373544 BMP6P22004 513 aa13.77□□□□□ -0.21
RABEPK-203ENST00000373544 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
RABEPK-203ENST00000373544 GNA11P29992 359 aa13.77□□□□□ -0.21
RABEPK-203ENST00000373544 NLRP12P59046 1061 aa13.77□□□□□ -0.21
RABEPK-203ENST00000373544 MDM2Q00987 491 aaPredicted RBP13.77□□□□□ -0.21
RABEPK-203ENST00000373544 POSTNQ15063 836 aa13.77□□□□□ -0.21
RABEPK-203ENST00000373544 TBC1D10BQ4KMP7 808 aaPredicted RBP13.77□□□□□ -0.21
RABEPK-203ENST00000373544 KIAA1755Q5JYT7 1200 aa13.77□□□□□ -0.21
RABEPK-203ENST00000373544 GPATCH4Q5T3I0 446 aaKnown RBP13.77□□□□□ -0.21
RABEPK-203ENST00000373544 MKL1Q969V6 931 aa13.77□□□□□ -0.21
RABEPK-203ENST00000373544 PLIN2Q99541 437 aa13.77□□□□□ -0.21
RABEPK-203ENST00000373544 PNMA6FA0A0J9YX94 578 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 NONOQ15233 471 aaKnown RBP eCLIP13.76□□□□□ -0.21
RABEPK-203ENST00000373544 QRICH1Q2TAL8 776 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 GLIS2Q9BZE0 524 aaPredicted RBP13.76□□□□□ -0.21
RABEPK-203ENST00000373544 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.76□□□□□ -0.21
RABEPK-203ENST00000373544 TUBE1Q9UJT0 475 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 SMCHD1A6NHR9 2005 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 TMEM232C9JQI7 657 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 ZBTB5O15062 677 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 BMP15O95972 392 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 TNNI2P48788 182 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
RABEPK-203ENST00000373544 ADCY7P51828 1080 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 GALNT17Q6IS24 598 aa13.76□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L15C9J2P7 530 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L13C9JLJ4 530 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L11C9JVI0 530 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L18D6R9N7 530 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L22D6RA61 530 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L17D6RBQ6 530 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L19D6RCP7 530 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L20D6RJB6 530 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 MYO1BO43795 1136 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L24Q0WX57 530 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 KARSQ15046 597 aaKnown RBP13.75□□□□□ -0.21
RABEPK-203ENST00000373544 CDC37Q16543 378 aaPredicted RBP13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USH1GQ495M9 461 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 USP17L6PQ6QN14 398 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 VPS33BQ9H267 617 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 TTC12Q9H892 705 aaPredicted RBP13.75□□□□□ -0.21
RABEPK-203ENST00000373544 HERC5Q9UII4 1024 aaKnown RBP13.75□□□□□ -0.21
RABEPK-203ENST00000373544 CD2APQ9Y5K6 639 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 RASA3Q14644 834 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 HSP90AA4PQ58FG1 418 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 KRT25Q7Z3Z0 450 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 ZBTB21Q9ULJ3 1066 aa13.75□□□□□ -0.21
RABEPK-203ENST00000373544 TDP2O95551 362 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 NEK8Q86SG6 692 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 ZSCAN30Q86W11 494 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 GJA10Q969M2 543 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 ZBED3Q96IU2 234 aaPredicted RBP13.74□□□□□ -0.21
RABEPK-203ENST00000373544 BLZF1Q9H2G9 400 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 CCDC39Q9UFE4 941 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 NRBP1Q9UHY1 535 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 MAN1B1Q9UKM7 699 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 FZD1Q9UP38 647 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 ZNF541Q9H0D2 1346 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 EDIL3O43854 480 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 ZNF75DP51815 510 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 TNIP1Q15025 636 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 PRAMEF18Q5VWM3 479 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 DTHD1Q6ZMT9 781 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 DRC7Q8IY82 874 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 PAGE5Q96GU1 130 aa13.74□□□□□ -0.21
RABEPK-203ENST00000373544 NAT10Q9H0A0 1025 aaKnown RBP13.74□□□□□ -0.21
RABEPK-203ENST00000373544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
RABEPK-203ENST00000373544 CAVIN2O95810 425 aa13.73□□□□□ -0.21
RABEPK-203ENST00000373544 DGKZQ13574 1117 aa13.73□□□□□ -0.21
RABEPK-203ENST00000373544 SLC37A4O43826 429 aa13.73□□□□□ -0.21
RABEPK-203ENST00000373544 BMP3P12645 472 aa13.73□□□□□ -0.21
RABEPK-203ENST00000373544 LMOD1P29536 600 aaPredicted RBP13.73□□□□□ -0.21
RABEPK-203ENST00000373544 SMYD4Q8IYR2 804 aaPredicted RBP13.73□□□□□ -0.21
RABEPK-203ENST00000373544 MTMR14Q8NCE2 650 aa13.73□□□□□ -0.21
RABEPK-203ENST00000373544 RASSF8Q8NHQ8 419 aa13.73□□□□□ -0.21
RABEPK-203ENST00000373544 SMARCE1Q969G3 411 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms