RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RAD21O60216 631 aa28.41■■■□□ 2.14
CTSA-203ENST00000372459 ZNF75DP51815 510 aa28.41■■■□□ 2.14
CTSA-203ENST00000372459 ADCY7P51828 1080 aa28.41■■■□□ 2.14
CTSA-203ENST00000372459 CIAPIN1Q6FI81 312 aa28.41■■■□□ 2.14
CTSA-203ENST00000372459 SIAH1Q8IUQ4 282 aa28.41■■■□□ 2.14
CTSA-203ENST00000372459 A0A087X0B3 334 aa28.4■■■□□ 2.14
CTSA-203ENST00000372459 ZBTB5O15062 677 aa28.4■■■□□ 2.14
CTSA-203ENST00000372459 SLFN14P0C7P3 912 aa28.4■■■□□ 2.14
CTSA-203ENST00000372459 SLC16A2P36021 539 aa28.4■■■□□ 2.14
CTSA-203ENST00000372459 TERF1P54274 439 aa28.4■■■□□ 2.14
CTSA-203ENST00000372459 IL17AQ16552 155 aa28.4■■■□□ 2.14
CTSA-203ENST00000372459 NT5DC1Q5TFE4 455 aa28.4■■■□□ 2.14
CTSA-203ENST00000372459 ISM2Q6H9L7 571 aa28.4■■■□□ 2.14
CTSA-203ENST00000372459 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.4■■■□□ 2.14
CTSA-203ENST00000372459 MTMR8Q96EF0 704 aa28.4■■■□□ 2.14
CTSA-203ENST00000372459 SMTNL1A8MU46 457 aa28.39■■■□□ 2.14
CTSA-203ENST00000372459 MYO1BO43795 1136 aa28.39■■■□□ 2.14
CTSA-203ENST00000372459 GH2P01242 217 aa28.39■■■□□ 2.14
CTSA-203ENST00000372459 GMCL1P1Q8NEA9 526 aa28.39■■■□□ 2.14
CTSA-203ENST00000372459 SMARCE1Q969G3 411 aa28.39■■■□□ 2.14
CTSA-203ENST00000372459 R3HDM1Q15032 1099 aaKnown RBP28.39■■■□□ 2.13
CTSA-203ENST00000372459 DTHD1Q6ZMT9 781 aa28.39■■■□□ 2.13
CTSA-203ENST00000372459 NEK8Q86SG6 692 aa28.39■■■□□ 2.13
CTSA-203ENST00000372459 VEZTQ9HBM0 779 aa28.39■■■□□ 2.13
CTSA-203ENST00000372459 CNTNAP1P78357 1384 aa28.38■■■□□ 2.13
CTSA-203ENST00000372459 USP17L10C9JJH3 530 aa28.38■■■□□ 2.13
CTSA-203ENST00000372459 BIN2Q9UBW5 565 aaPredicted RBP28.38■■■□□ 2.13
CTSA-203ENST00000372459 CD2APQ9Y5K6 639 aa28.38■■■□□ 2.13
CTSA-203ENST00000372459 PRR29P0C7W0 189 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 SARSP49591 514 aaKnown RBP28.37■■■□□ 2.13
CTSA-203ENST00000372459 TPM4P67936 248 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 SYNPO2Q9UMS6 1093 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 F5H6K3 240 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 TPM3P06753 285 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 TXLNAP40222 546 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 PRPHP41219 470 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 KLRC3Q07444 240 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 ORC2Q13416 577 aaPredicted RBP28.37■■■□□ 2.13
CTSA-203ENST00000372459 TNIP1Q15025 636 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 LETM2Q2VYF4 491 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 JAKMIP3Q5VZ66 844 aa28.37■■■□□ 2.13
CTSA-203ENST00000372459 NFKBIEO00221 500 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 IKBKBO14920 756 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 PPP1R11O60927 126 aaPredicted RBP28.36■■■□□ 2.13
CTSA-203ENST00000372459 RRP1BQ14684 758 aaKnown RBP28.36■■■□□ 2.13
CTSA-203ENST00000372459 FAM83AQ86UY5 434 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 GRAMD1CQ8IYS0 662 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 TRIML1Q8N9V2 468 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 IQUBQ8NA54 791 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 SPC24Q8NBT2 197 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 TBCKQ8TEA7 893 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 GMCL1Q96IK5 515 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 TMEM60Q9H2L4 133 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 RIC8AQ9NPQ8 531 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 MAN1B1Q9UKM7 699 aa28.36■■■□□ 2.13
CTSA-203ENST00000372459 CCNT1O60563 726 aaKnown RBP28.35■■■□□ 2.13
CTSA-203ENST00000372459 SMC2O95347 1197 aa28.35■■■□□ 2.13
CTSA-203ENST00000372459 MMP14P50281 582 aa28.35■■■□□ 2.13
CTSA-203ENST00000372459 JAG1P78504 1218 aa28.35■■■□□ 2.13
CTSA-203ENST00000372459 SH3RF1Q7Z6J0 888 aa28.35■■■□□ 2.13
CTSA-203ENST00000372459 ZBED3Q96IU2 234 aaPredicted RBP28.35■■■□□ 2.13
CTSA-203ENST00000372459 CDC25BP30305 580 aa28.35■■■□□ 2.13
CTSA-203ENST00000372459 SPATA20Q8TB22 786 aa28.35■■■□□ 2.13
CTSA-203ENST00000372459 PAGE5Q96GU1 130 aa28.35■■■□□ 2.13
CTSA-203ENST00000372459 TMEM260Q9NX78 707 aa28.35■■■□□ 2.13
CTSA-203ENST00000372459 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.35■■■□□ 2.13
CTSA-203ENST00000372459 ARFGEF1Q9Y6D6 1849 aa28.35■■■□□ 2.13
CTSA-203ENST00000372459 SGIP1Q9BQI5 828 aa28.34■■■□□ 2.13
CTSA-203ENST00000372459 BCS1LQ9Y276 419 aa28.34■■■□□ 2.13
CTSA-203ENST00000372459 NDUFB10O96000 172 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 DRC7Q8IY82 874 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 CUL5Q93034 780 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 MRFAP1L1Q96HT8 127 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 MYOZ2Q9NPC6 264 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 WNT10BO00744 389 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 TBC1D12O60347 775 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 NEMFO60524 1076 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 MRPL12P52815 198 aaKnown RBP28.33■■■□□ 2.13
CTSA-203ENST00000372459 E2F4Q16254 413 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 DACH1Q9UI36 760 aa28.33■■■□□ 2.13
CTSA-203ENST00000372459 OR52Z1P0C646 297 aa28.32■■■□□ 2.12
CTSA-203ENST00000372459 AFMP43652 599 aa28.32■■■□□ 2.12
CTSA-203ENST00000372459 MORC3Q14149 939 aa28.32■■■□□ 2.12
CTSA-203ENST00000372459 NCAPHQ15003 741 aa28.32■■■□□ 2.12
CTSA-203ENST00000372459 TMEM39BQ9GZU3 492 aa28.32■■■□□ 2.12
CTSA-203ENST00000372459 GLT8D2Q9H1C3 349 aa28.32■■■□□ 2.12
CTSA-203ENST00000372459 ARHGEF10LQ9HCE6 1279 aa28.32■■■□□ 2.12
CTSA-203ENST00000372459 QRICH1Q2TAL8 776 aa28.31■■■□□ 2.12
CTSA-203ENST00000372459 MLKLQ8NB16 471 aa28.31■■■□□ 2.12
CTSA-203ENST00000372459 LTBP3Q9NS15 1303 aa28.31■■■□□ 2.12
CTSA-203ENST00000372459 BMP6P22004 513 aa28.31■■■□□ 2.12
CTSA-203ENST00000372459 RPS12P25398 132 aaKnown RBP28.31■■■□□ 2.12
CTSA-203ENST00000372459 MYL5Q02045 173 aa28.31■■■□□ 2.12
CTSA-203ENST00000372459 CDC37Q16543 378 aaPredicted RBP28.31■■■□□ 2.12
CTSA-203ENST00000372459 BMP3P12645 472 aa28.3■■■□□ 2.12
CTSA-203ENST00000372459 CLK2P49760 499 aaKnown RBP28.3■■■□□ 2.12
CTSA-203ENST00000372459 NBPF9Q3BBW0 867 aa28.3■■■□□ 2.12
CTSA-203ENST00000372459 PSTPIP2Q9H939 334 aa28.3■■■□□ 2.12
CTSA-203ENST00000372459 AK8Q96MA6 479 aa28.3■■■□□ 2.12
CTSA-203ENST00000372459 A0A1W2PRG0 241 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms