RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 CD2APQ9Y5K6 639 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 CDK12Q9NYV4 1490 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-202ENST00000372216 SSH2Q76I76 1423 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 OPA1O60313 960 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 STK10O94804 968 aaKnown RBP10.81□□□□□ -0.68
COL4A6-202ENST00000372216 MMP10P09238 476 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 PCDHA12Q9UN75 941 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 NOC2LQ9Y3T9 749 aaKnown RBP10.81□□□□□ -0.68
COL4A6-202ENST00000372216 USP17L3A6NCW0 530 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 USP17L4A6NCW7 530 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 PFKFB2O60825 505 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 TTLL1O95922 423 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 HPDP32754 393 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-202ENST00000372216 CCNA1P78396 465 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 CALCOCO2Q13137 446 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 USP17L1Q7RTZ2 530 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 MICAL1Q8TDZ2 1067 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 GANCQ8TET4 914 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 MASTLQ96GX5 879 aa10.81□□□□□ -0.68
COL4A6-202ENST00000372216 DYNC1I1O14576 645 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 CEP85LQ5SZL2 805 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 SUGCTQ9HAC7 445 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 BNIP3LO60238 219 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 OR52Z1P0C646 297 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 PCP11498 1178 aaKnown RBP10.8□□□□□ -0.68
COL4A6-202ENST00000372216 CC2D2BQ6DHV5 1058 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 UBL4BQ8N7F7 174 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 TTLL6Q8N841 843 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 CSRNP2Q9H175 543 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 PANK4Q9NVE7 773 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 GADD45BO75293 160 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-202ENST00000372216 ADD1P35611 737 aaKnown RBP10.8□□□□□ -0.68
COL4A6-202ENST00000372216 UBXN2AP68543 259 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 GALNT17Q6IS24 598 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 DCUN1D2Q6PH85 259 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 ARFGAP3Q9NP61 516 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 ESYT2A0FGR8 921 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 NR1I2O75469 434 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 CIAPIN1Q6FI81 312 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 KRT26Q7Z3Y9 468 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 CCDC17Q96LX7 622 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 PCDHA1Q9Y5I3 950 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 POLGP54098 1239 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-202ENST00000372216 YWHAEP62258 255 aaKnown RBP10.8□□□□□ -0.68
COL4A6-202ENST00000372216 CTTNBP2NLQ9P2B4 639 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 TPCN1Q9ULQ1 816 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 PCDHB13Q9Y5F0 798 aa10.8□□□□□ -0.68
COL4A6-202ENST00000372216 C21orf2O43822 256 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 ZMYM1Q5SVZ6 1142 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 CAPN12Q6ZSI9 719 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 MIGA2Q7L4E1 593 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 NRBP2Q9NSY0 501 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 POLIQ9UNA4 740 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 SLC9C1Q4G0N8 1177 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
COL4A6-202ENST00000372216 CCDC170Q8IYT3 715 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 CCDC26Q8TAB7 109 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 POMGNT1Q8WZA1 660 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 DACT3Q96B18 629 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-202ENST00000372216 LSM14BQ9BX40 385 aaKnown RBP10.79□□□□□ -0.68
COL4A6-202ENST00000372216 LRFN2Q9ULH4 789 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 VIMP08670 466 aaKnown RBP10.79□□□□□ -0.68
COL4A6-202ENST00000372216 ASPRV1Q53RT3 343 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 ZHX1Q9UKY1 873 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-202ENST00000372216 PLA2R1Q13018 1463 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 CAPN9O14815 690 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 GNA14O95837 355 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 TNNC2P02585 160 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 CASP2P42575 452 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 SARNPP82979 210 aaKnown RBP10.79□□□□□ -0.68
COL4A6-202ENST00000372216 RNF217Q8TC41 542 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 IWS1Q96ST2 819 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 CBX8Q9HC52 389 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 ADD2P35612 726 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 ARHGEF6Q15052 776 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 SFMBT2Q5VUG0 894 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 MYSM1Q5VVJ2 828 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 LCORLQ8N3X6 602 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 RTEL1Q9NZ71 1219 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 PIM2Q9P1W9 311 aa10.79□□□□□ -0.68
COL4A6-202ENST00000372216 CDC42BPAQ5VT25 1732 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 DMP1Q13316 513 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-202ENST00000372216 TMTC4Q5T4D3 741 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 CEP57Q86XR8 500 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 ACRBPQ8NEB7 543 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 ANTXR1Q9H6X2 564 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 A2ML1A8K2U0 1454 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 CLTCL1P53675 1640 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 RPS6KA4O75676 772 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 SLC16A2P36021 539 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 IL1RL1Q01638 556 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 PLCB4Q15147 1175 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 GKAP1Q5VSY0 366 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-202ENST00000372216 VPS18Q9P253 973 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 SEPT9Q9UHD8 586 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-202ENST00000372216 TNS3Q68CZ2 1445 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 IQGAP3Q86VI3 1631 aa10.78□□□□□ -0.68
COL4A6-202ENST00000372216 AMNQ9BXJ7 453 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms