RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 KLHL30Q0D2K2 578 aa10.13□□□□□ -0.79
SMARCA1-202ENST00000371122 UBE2SQ16763 222 aa10.13□□□□□ -0.79
SMARCA1-202ENST00000371122 CCDC127Q96BQ5 260 aa10.13□□□□□ -0.79
SMARCA1-202ENST00000371122 PIGSQ96S52 555 aa10.13□□□□□ -0.79
SMARCA1-202ENST00000371122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.13□□□□□ -0.79
SMARCA1-202ENST00000371122 SH2B2O14492 632 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 EXOC3O60645 756 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 VAV2P52735 878 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 CFAP58Q5T655 872 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 CLEC10AQ8IUN9 316 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 IFIH1Q9BYX4 1025 aaKnown RBP10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 LRRC27Q9C0I9 530 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 USTQ9Y2C2 406 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 ATP6V0A2Q9Y487 856 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 MECOMQ03112 1051 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 RBL2Q08999 1139 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 CNNM4Q6P4Q7 775 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 GPBP1Q86WP2 473 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 TDRD7Q8NHU6 1098 aaKnown RBP10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 FERMT2Q96AC1 680 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 PSTPIP2Q9H939 334 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 EHMT1Q9H9B1 1298 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 KIF28PB7ZC32 967 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 POTEB2H3BUK9 544 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 IL6STP40189 918 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 SMC1AQ14683 1233 aaKnown RBP10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 C8orf74Q6P047 294 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 USP49Q70CQ1 688 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 MIGA2Q7L4E1 593 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 SLC35F6Q8N357 371 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 OR8K1Q8NGG5 319 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 KCNK9Q9NPC2 374 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 PCDHA1Q9Y5I3 950 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 SPOPO43791 374 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 MCM3P25205 808 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 ATP1A2P50993 1020 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 SECISBP2LQ93073 1101 aaKnown RBP10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 PPP1R13BQ96KQ4 1090 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 CCDC114Q96M63 670 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 IRX2Q9BZI1 471 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 SPTLC3Q9NUV7 552 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 MAN1B1Q9UKM7 699 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 KIAA1024Q9UPX6 916 aa10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 CDK12Q9NYV4 1490 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-202ENST00000371122 SLIT2O94813 1529 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 TRIM49BA6NDI0 452 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 SFI1A8K8P3 1242 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 VGLL3A8MV65 326 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 RPN1P04843 607 aaKnown RBP10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 ALAS1P13196 640 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 POLR2FP61218 127 aaKnown RBP10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 PHLDB2Q86SQ0 1253 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 MRFAP1L1Q96HT8 127 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 SELENOOQ9BVL4 669 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 PODXL2Q9NZ53 605 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 A0A1W2PRG0 241 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 RAD17O75943 681 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 CAPN12Q6ZSI9 719 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 KRT25Q7Z3Z0 450 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 TMTC1Q8IUR5 882 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 DNM3Q9UQ16 869 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 CLIC2O15247 247 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 KCTD16Q68DU8 428 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 TBCKQ8TEA7 893 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.794e-8■■■■□ 19.8
SMARCA1-202ENST00000371122 JCADQ9P266 1359 aa10.11□□□□□ -0.79
SMARCA1-202ENST00000371122 SHANK3Q9BYB0 1731 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 TESPA1A2RU30 521 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 TNFAIP3P21580 790 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 CEP57Q86XR8 500 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 LSM14BQ9BX40 385 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 H0YIN7 160 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 BUB1BO60566 1050 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 MMP1P03956 469 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 OR52Z1P0C646 297 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 HOXA13P31271 388 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 HDXQ7Z353 690 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 ATG9AQ7Z3C6 839 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 NEK8Q86SG6 692 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 DAAM2Q86T65 1068 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 POLR3EQ9NVU0 708 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 IMPACTQ9P2X3 320 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 DDX41Q9UJV9 622 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 FRMD4BQ9Y2L6 1034 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 EPB41P11171 864 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 FOXO4P98177 505 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 UAP1Q16222 522 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 SLC9C1Q4G0N8 1177 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 U2AF1L4Q8WU68 220 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 HPS3Q969F9 1004 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 TEKT1Q969V4 418 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 CTTNBP2NLQ9P2B4 639 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 BCS1LQ9Y276 419 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 THSD7AQ9UPZ6 1657 aa10.1□□□□□ -0.79
SMARCA1-202ENST00000371122 CIAO1O76071 339 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms