RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 PFKFB3Q16875 520 aaPredicted RBP20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 QRICH1Q2TAL8 776 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 MB21D1Q8N884 522 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 WASF1Q92558 559 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 DDX11Q96FC9 970 aa20.69■□□□□ 0.9
SDCBP2-201ENST00000339987 MYH6P13533 1939 aa20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 AOC2O75106 756 aa20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 PPFIA3O75145 1194 aa20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 PKN1Q16512 942 aa20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 SAMD1Q6SPF0 538 aaPredicted RBP20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 HOMER1Q86YM7 354 aa20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 REPS2Q8NFH8 660 aa20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 IPO9Q96P70 1041 aaKnown RBP20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 PARK7Q99497 189 aaKnown RBP20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 DAXXQ9UER7 740 aaPredicted RBP20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 PNMA2Q9UL42 364 aa20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 KIF3AQ9Y496 699 aa20.68■□□□□ 0.9
SDCBP2-201ENST00000339987 hCG_1642624A0A1W2PR95 340 aa20.67■□□□□ 0.9
SDCBP2-201ENST00000339987 DTNBO60941 627 aa20.67■□□□□ 0.9
SDCBP2-201ENST00000339987 SCG2P13521 617 aa20.67■□□□□ 0.9
SDCBP2-201ENST00000339987 GJB2P29033 226 aa20.67■□□□□ 0.9
SDCBP2-201ENST00000339987 OAZ1P54368 228 aa20.67■□□□□ 0.9
SDCBP2-201ENST00000339987 TRAF1Q13077 416 aa20.67■□□□□ 0.9
SDCBP2-201ENST00000339987 PIBF1Q8WXW3 757 aa20.67■□□□□ 0.9
SDCBP2-201ENST00000339987 FOXD4L1Q9NU39 408 aa20.67■□□□□ 0.9
SDCBP2-201ENST00000339987 hCG_1984214I3L0E3 225 aa20.66■□□□□ 0.9
SDCBP2-201ENST00000339987 ATP2A1O14983 1001 aa20.66■□□□□ 0.9
SDCBP2-201ENST00000339987 SLC4A3P48751 1232 aa20.66■□□□□ 0.9
SDCBP2-201ENST00000339987 SNAP25P60880 206 aa20.66■□□□□ 0.9
SDCBP2-201ENST00000339987 ZNF713Q8N859 430 aaPredicted RBP20.66■□□□□ 0.9
SDCBP2-201ENST00000339987 FAM184AQ8NB25 1140 aa20.66■□□□□ 0.9
SDCBP2-201ENST00000339987 AMNQ9BXJ7 453 aa20.66■□□□□ 0.9
SDCBP2-201ENST00000339987 CTDP1Q9Y5B0 961 aaPredicted RBP20.66■□□□□ 0.9
SDCBP2-201ENST00000339987 PPP1R11O60927 126 aaPredicted RBP20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 ICAM1P05362 532 aa20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 CYP2C8P10632 490 aa20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 GCLCP48506 637 aaPredicted RBP20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 POTEEQ6S8J3 1075 aa20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 FBXO11Q86XK2 927 aa20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 FAM177A1Q8N128 213 aaPredicted RBP20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 ALG1Q9BT22 464 aa20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 CWC22Q9HCG8 908 aaKnown RBP20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 RABGAP1Q9Y3P9 1069 aa20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 COL11A1P12107 1806 aaPredicted RBP20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 ZNF536O15090 1300 aa20.65■□□□□ 0.9
SDCBP2-201ENST00000339987 ALDH1A1P00352 501 aa20.64■□□□□ 0.89
SDCBP2-201ENST00000339987 CCDC174Q6PII3 467 aa20.64■□□□□ 0.89
SDCBP2-201ENST00000339987 SPRYD3Q8NCJ5 442 aa20.64■□□□□ 0.89
SDCBP2-201ENST00000339987 SMCR8Q8TEV9 937 aaPredicted RBP20.64■□□□□ 0.89
SDCBP2-201ENST00000339987 BARHL2Q9NY43 387 aa20.64■□□□□ 0.89
SDCBP2-201ENST00000339987 ZNF214Q9UL59 606 aaPredicted RBP20.64■□□□□ 0.89
SDCBP2-201ENST00000339987 ADGRA2Q96PE1 1338 aa20.64■□□□□ 0.89
SDCBP2-201ENST00000339987 TMEM132BQ14DG7 1078 aa20.63■□□□□ 0.89
SDCBP2-201ENST00000339987 TAF1CQ15572 869 aaPredicted RBP20.63■□□□□ 0.89
SDCBP2-201ENST00000339987 WWC2Q6AWC2 1192 aa20.63■□□□□ 0.89
SDCBP2-201ENST00000339987 PPP1R18Q6NYC8 613 aa20.63■□□□□ 0.89
SDCBP2-201ENST00000339987 HEATR3Q7Z4Q2 680 aa20.63■□□□□ 0.89
SDCBP2-201ENST00000339987 RGS22Q8NE09 1264 aa20.63■□□□□ 0.89
SDCBP2-201ENST00000339987 AIFM3Q96NN9 605 aa20.63■□□□□ 0.89
SDCBP2-201ENST00000339987 SH3GLB2Q9NR46 395 aa20.63■□□□□ 0.89
SDCBP2-201ENST00000339987 BTBD7Q9P203 1132 aa20.63■□□□□ 0.89
SDCBP2-201ENST00000339987 STXBP3O00186 592 aa20.62■□□□□ 0.89
SDCBP2-201ENST00000339987 CNMDO75829 334 aa20.62■□□□□ 0.89
SDCBP2-201ENST00000339987 GPKOWQ92917 476 aaPredicted RBP eCLIP20.62■□□□□ 0.89
SDCBP2-201ENST00000339987 TEX13BQ9BXU2 312 aa20.62■□□□□ 0.89
SDCBP2-201ENST00000339987 RAVER2Q9HCJ3 691 aaKnown RBP20.62■□□□□ 0.89
SDCBP2-201ENST00000339987 RBPJLQ9UBG7 517 aa20.62■□□□□ 0.89
SDCBP2-201ENST00000339987 MORF4L1Q9UBU8 362 aa20.62■□□□□ 0.89
SDCBP2-201ENST00000339987 CCPG1Q9ULG6 757 aa20.62■□□□□ 0.89
SDCBP2-201ENST00000339987 ABCB11O95342 1321 aa20.62■□□□□ 0.89
SDCBP2-201ENST00000339987 XBP1P17861 261 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 PDCP20941 246 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 CPXCR1Q8N123 301 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 CCDC12Q8WUD4 166 aaPredicted RBP20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 AGBL1Q96MI9 1066 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 ZFYVE28Q9HCC9 887 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 PCDHA1Q9Y5I3 950 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 CA12O43570 354 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 STAT3P40763 770 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 TKFCQ3LXA3 575 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 CCDC148Q8NFR7 591 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 COA7Q96BR5 231 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 C8orf76Q96K31 380 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 PAGR1Q9BTK6 254 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 TXNRD2Q9NNW7 524 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 VPS54Q9P1Q0 977 aa20.61■□□□□ 0.89
SDCBP2-201ENST00000339987 ESYT2A0FGR8 921 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 COPB2P35606 906 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 NAPAP54920 295 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 ERVK-9P63128 1117 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 ERVK-24P63145 666 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 USH1GQ495M9 461 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 SNRNP48Q6IEG0 339 aaKnown RBP20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 TYW1BQ6NUM6 668 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 RIOX2Q8IUF8 465 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 SHISA4Q96DD7 197 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 SPATC1LQ9H0A9 340 aa20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 MRPL11Q9Y3B7 192 aaKnown RBP20.6■□□□□ 0.89
SDCBP2-201ENST00000339987 TLR2O60603 784 aa20.59■□□□□ 0.89
SDCBP2-201ENST00000339987 PDIA4P13667 645 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms