RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 KLK7P49862 253 aa26.43■■□□□ 1.82
TSKU-201ENST00000333090 DNM2P50570 870 aa26.43■■□□□ 1.82
TSKU-201ENST00000333090 MEA1Q16626 185 aa26.43■■□□□ 1.82
TSKU-201ENST00000333090 ZNF34Q8IZ26 560 aa26.43■■□□□ 1.82
TSKU-201ENST00000333090 RIOK1Q9BRS2 568 aaKnown RBP26.43■■□□□ 1.82
TSKU-201ENST00000333090 PP2D1A8MPX8 630 aa26.42■■□□□ 1.82
TSKU-201ENST00000333090 PSMA7O14818 248 aa26.42■■□□□ 1.82
TSKU-201ENST00000333090 IGHMBP2P38935 993 aaKnown RBP26.42■■□□□ 1.82
TSKU-201ENST00000333090 DNAJC21Q5F1R6 531 aaKnown RBP26.42■■□□□ 1.82
TSKU-201ENST00000333090 SUSD4Q5VX71 490 aa26.42■■□□□ 1.82
TSKU-201ENST00000333090 PPM1EQ8WY54 764 aa26.42■■□□□ 1.82
TSKU-201ENST00000333090 THAP9Q9H5L6 903 aa26.42■■□□□ 1.82
TSKU-201ENST00000333090 AGPSO00116 658 aa26.42■■□□□ 1.82
TSKU-201ENST00000333090 ARL6IP4Q66PJ3 421 aaKnown RBP26.42■■□□□ 1.82
TSKU-201ENST00000333090 FAM76AQ8TAV0 307 aa26.42■■□□□ 1.82
TSKU-201ENST00000333090 PCMTD1Q96MG8 357 aaPredicted RBP26.42■■□□□ 1.82
TSKU-201ENST00000333090 NAALADL2Q58DX5 795 aa26.41■■□□□ 1.82
TSKU-201ENST00000333090 TUBGCP2Q9BSJ2 902 aa26.41■■□□□ 1.82
TSKU-201ENST00000333090 GOLGA6BA6NDN3 693 aa26.41■■□□□ 1.82
TSKU-201ENST00000333090 WTIPA6NIX2 430 aaPredicted RBP26.41■■□□□ 1.82
TSKU-201ENST00000333090 EXOC1Q9NV70 894 aa26.41■■□□□ 1.82
TSKU-201ENST00000333090 ABCA3Q99758 1704 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 ERVV-1B6SEH8 477 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 SRGNP10124 158 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 EVX2Q03828 476 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 CHRNDQ07001 517 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 RASGRP4Q8TDF6 673 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 GOLGA6CA6NDK9 693 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 ADAMTS2O95450 1211 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 GOLGA6DP0CG33 693 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 TBC1D8BQ0IIM8 1120 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 ZNF662Q6ZS27 426 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 SMIM5Q71RC9 77 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 CSGALNACT2Q8N6G5 542 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 C4orf32Q8N8J7 132 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 GOLGA6AQ9NYA3 693 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 DUOX1Q9NRD9 1551 aa26.4■■□□□ 1.82
TSKU-201ENST00000333090 PLCH1Q4KWH8 1693 aa26.39■■□□□ 1.82
TSKU-201ENST00000333090 ANO9A1A5B4 782 aa26.39■■□□□ 1.82
TSKU-201ENST00000333090 EXOC5O00471 708 aa26.39■■□□□ 1.82
TSKU-201ENST00000333090 PFKFB3Q16875 520 aaPredicted RBP26.39■■□□□ 1.82
TSKU-201ENST00000333090 FAM47AQ5JRC9 791 aa26.39■■□□□ 1.82
TSKU-201ENST00000333090 TTYH3Q9C0H2 523 aa26.39■■□□□ 1.82
TSKU-201ENST00000333090 NUP98P52948 1817 aa26.39■■□□□ 1.82
TSKU-201ENST00000333090 USP17L12C9JPN9 530 aa26.39■■□□□ 1.81
TSKU-201ENST00000333090 USP17L21D6R901 530 aa26.39■■□□□ 1.81
TSKU-201ENST00000333090 GYG1P46976 350 aa26.39■■□□□ 1.81
TSKU-201ENST00000333090 KAT14Q9H8E8 782 aa26.39■■□□□ 1.81
TSKU-201ENST00000333090 BAZ2AQ9UIF9 1905 aaKnown RBP26.39■■□□□ 1.81
TSKU-201ENST00000333090 ANKRD36CQ5JPF3 1778 aa26.39■■□□□ 1.81
TSKU-201ENST00000333090 KIF5AQ12840 1032 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 IQCEQ6IPM2 695 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 TTI2Q6NXR4 508 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 SECISBP2LQ93073 1101 aaKnown RBP26.38■■□□□ 1.81
TSKU-201ENST00000333090 FAM205AQ6ZU69 1335 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 BCL9O00512 1426 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 STRCQ7RTU9 1775 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 KDM4FA0A1W2PPD8 638 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 CCDC70Q6NSX1 233 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 DTHD1Q6ZMT9 781 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 CCDC170Q8IYT3 715 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 RASSF10A6NK89 507 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 KLRC4O43908 158 aa26.38■■□□□ 1.81
TSKU-201ENST00000333090 SMCR8Q8TEV9 937 aaPredicted RBP26.38■■□□□ 1.81
TSKU-201ENST00000333090 GPKOWQ92917 476 aaPredicted RBP eCLIP26.38■■□□□ 1.81
TSKU-201ENST00000333090 UBA7P41226 1012 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 KCNQ4P56696 695 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 ZBED6P86452 979 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 KCNB1Q14721 858 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 CCDC152Q4G0S7 254 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 BLIDQ8IZY5 108 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 DRC1Q96MC2 740 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 BRIP1Q9BX63 1249 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 LRWD1Q9UFC0 647 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 FAM184BQ9ULE4 1060 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.37■■□□□ 1.81
TSKU-201ENST00000333090 EZH2Q15910 746 aaKnown RBP26.37■■□□□ 1.81
TSKU-201ENST00000333090 CCDC96Q2M329 555 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 ICE2Q659A1 982 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 SND1Q7KZF4 910 aaKnown RBP eCLIP26.37■■□□□ 1.81
TSKU-201ENST00000333090 KRT26Q7Z3Y9 468 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 EFCAB13Q8IY85 973 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 GIMAP8Q8ND71 665 aaPredicted RBP26.37■■□□□ 1.81
TSKU-201ENST00000333090 NUP58Q9BVL2 599 aa26.37■■□□□ 1.81
TSKU-201ENST00000333090 SLIT2O94813 1529 aa26.36■■□□□ 1.81
TSKU-201ENST00000333090 MRPS25P82663 173 aaKnown RBP26.36■■□□□ 1.81
TSKU-201ENST00000333090 HDAC7Q8WUI4 952 aa26.36■■□□□ 1.81
TSKU-201ENST00000333090 NUTM2BA6NNL0 878 aaPredicted RBP26.36■■□□□ 1.81
TSKU-201ENST00000333090 NUTM2EB1AL46 878 aaPredicted RBP26.36■■□□□ 1.81
TSKU-201ENST00000333090 SHOX2O60902 331 aaPredicted RBP26.36■■□□□ 1.81
TSKU-201ENST00000333090 RHOBTB3O94955 611 aa26.36■■□□□ 1.81
TSKU-201ENST00000333090 CERS3Q8IU89 383 aa26.36■■□□□ 1.81
TSKU-201ENST00000333090 DUSP9Q99956 384 aaKnown RBP26.36■■□□□ 1.81
TSKU-201ENST00000333090 RABEP2Q9H5N1 569 aa26.36■■□□□ 1.81
TSKU-201ENST00000333090 CALML3P27482 149 aa26.35■■□□□ 1.81
TSKU-201ENST00000333090 CCT5P48643 541 aa26.35■■□□□ 1.81
TSKU-201ENST00000333090 VAV2P52735 878 aa26.35■■□□□ 1.81
TSKU-201ENST00000333090 AENQ8WTP8 325 aaKnown RBP26.35■■□□□ 1.81
TSKU-201ENST00000333090 CCDC42Q96M95 316 aa26.35■■□□□ 1.81
TSKU-201ENST00000333090 PURBQ96QR8 312 aaKnown RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms