RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 NPC1L1Q9UHC9 1359 aa10.02□□□□□ -0.81
CTC1-201ENST00000315684 NEK8Q86SG6 692 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 FOXP4Q8IVH2 680 aaPredicted RBP10.01□□□□□ -0.81
CTC1-201ENST00000315684 POMGNT1Q8WZA1 660 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 MYO1AQ9UBC5 1043 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 CCDC85CA6NKD9 419 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 ASPRV1Q53RT3 343 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 CAPN9O14815 690 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 CAMTA2O94983 1202 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 TBC1D8BQ0IIM8 1120 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 SCYL2Q6P3W7 929 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 TSNARE1Q96NA8 513 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 KIAA1024Q9UPX6 916 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 ABCB11O95342 1321 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 DENND3A2RUS2 1198 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 ZSCAN12O43309 604 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 ZKSCAN4Q969J2 545 aaPredicted RBP10.01□□□□□ -0.81
CTC1-201ENST00000315684 IRX5P78411 483 aaPredicted RBP10.01□□□□□ -0.81
CTC1-201ENST00000315684 ME3Q16798 604 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 TMEM179Q6ZVK1 233 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 CROCC2H7BZ55 1655 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 TNNC2P02585 160 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 CYP2E1P05181 493 aaPredicted RBP10.01□□□□□ -0.81
CTC1-201ENST00000315684 TNFAIP3P21580 790 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 PTPN14Q15678 1187 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 KIAA0753Q2KHM9 967 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 PPP1R21Q6ZMI0 780 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 CLEC10AQ8IUN9 316 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 KIFAP3Q92845 792 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 CAPZA3Q96KX2 299 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 C16orf45Q96MC5 204 aaPredicted RBP10.01□□□□□ -0.81
CTC1-201ENST00000315684 PCIF1Q9H4Z3 704 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 POLD4Q9HCU8 107 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 ATP6V0A2Q9Y487 856 aa10.01□□□□□ -0.81
CTC1-201ENST00000315684 MED14O60244 1454 aa10□□□□□ -0.81
CTC1-201ENST00000315684 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
CTC1-201ENST00000315684 CSGALNACT2Q8N6G5 542 aa10□□□□□ -0.81
CTC1-201ENST00000315684 MRRFQ96E11 262 aaKnown RBP10□□□□□ -0.81
CTC1-201ENST00000315684 PTPRUQ92729 1446 aa10□□□□□ -0.81
CTC1-201ENST00000315684 GSPT1P15170 499 aaKnown RBP10□□□□□ -0.81
CTC1-201ENST00000315684 GPATCH4Q5T3I0 446 aaKnown RBP10□□□□□ -0.81
CTC1-201ENST00000315684 RMDN3Q96TC7 470 aa10□□□□□ -0.81
CTC1-201ENST00000315684 PANK4Q9NVE7 773 aa10□□□□□ -0.81
CTC1-201ENST00000315684 TSKSQ9UJT2 592 aa10□□□□□ -0.81
CTC1-201ENST00000315684 BNIP3LO60238 219 aa10□□□□□ -0.81
CTC1-201ENST00000315684 EZRP15311 586 aaKnown RBP10□□□□□ -0.81
CTC1-201ENST00000315684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10□□□□□ -0.817e-6■■■■□ 21
CTC1-201ENST00000315684 TLR3O15455 904 aaKnown RBP10□□□□□ -0.81
CTC1-201ENST00000315684 TMEM191BP0C7N4 346 aa10□□□□□ -0.81
CTC1-201ENST00000315684 ATN1P54259 1190 aaPredicted RBP10□□□□□ -0.81
CTC1-201ENST00000315684 ITKQ08881 620 aa10□□□□□ -0.81
CTC1-201ENST00000315684 LEO1Q8WVC0 666 aaPredicted RBP10□□□□□ -0.81
CTC1-201ENST00000315684 TTC12Q9H892 705 aaPredicted RBP10□□□□□ -0.81
CTC1-201ENST00000315684 BTBD18B2RXH4 712 aa10□□□□□ -0.81
CTC1-201ENST00000315684 KBTBD13C9JR72 458 aa10□□□□□ -0.81
CTC1-201ENST00000315684 CETN3O15182 167 aa10□□□□□ -0.81
CTC1-201ENST00000315684 CTSHP09668 335 aa10□□□□□ -0.81
CTC1-201ENST00000315684 SNAPC2Q13487 334 aa10□□□□□ -0.81
CTC1-201ENST00000315684 FAM178BQ8IXR5 827 aa10□□□□□ -0.81
CTC1-201ENST00000315684 SLFN12Q8IYM2 578 aa10□□□□□ -0.81
CTC1-201ENST00000315684 TTC30BQ8N4P2 665 aa10□□□□□ -0.81
CTC1-201ENST00000315684 PAIP2Q9BPZ3 127 aaKnown RBP10□□□□□ -0.81
CTC1-201ENST00000315684 PTPROQ16827 1216 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 POTEAQ6S8J7 498 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 FASTKD5Q7L8L6 764 aaKnown RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 PNMA8AQ86V59 439 aaPredicted RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 SLC7A3Q8WY07 619 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 FAM84BQ96KN1 310 aaPredicted RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 ZSWIM5Q9P217 1185 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 RIPOR2Q9Y4F9 1068 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 IKBKGQ9Y6K9 419 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 KARSQ15046 597 aaKnown RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 RYBPQ8N488 228 aaPredicted RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 DISC1Q9NRI5 854 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 PNPLA6Q8IY17 1366 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 SPDYE16A6NNV3 312 aaPredicted RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 CTTNQ14247 550 aaKnown RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 ZSCAN23Q3MJ62 389 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 ZMYM1Q5SVZ6 1142 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 CLIC6Q96NY7 704 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 RNF146Q9NTX7 359 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 ZNF70Q9UC06 446 aaPredicted RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 ELP1O95163 1332 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 C6orf222P0C671 652 aaPredicted RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 GYS1P13807 737 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 TFDP1Q14186 410 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 ARMCX5Q6P1M9 558 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
CTC1-201ENST00000315684 TBCKQ8TEA7 893 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 CTAGE1Q96RT6 745 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 DEFB129Q9H1M3 183 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 MROH7-TTC4A0A0A0MT08 1334 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 ZMYM6O95789 1325 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 GOLGA6CA6NDK9 693 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 GOLGA6BA6NDN3 693 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 GOLGA6DP0CG33 693 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 ELF1P32519 619 aa9.99□□□□□ -0.81
CTC1-201ENST00000315684 PPP2R5BQ15173 497 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms